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  • Bozeman, MT

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  • haystack Public

    Kotlin Updated Jan 28, 2021

  • beakerx_kernel_base Public

    Forked from twosigma/beakerx_kernel_base

    Base repository for BeakerX JVM based kernels

    Java Apache License 2.0 Updated Oct 22, 2020

  • oh-my-dir Public

    Per-project environments for Conda, Julia, Perl, Python, Rust, and more

    environment virtualenv direnv pyenv conda-environment
    Shell 6 2 Updated Sep 21, 2018

  • callysto Public

    Create domain-specific kernels for the Jupyter platform by extending a Python class.

    Python 2 Updated Jun 30, 2016

  • callysto-examples Public

    Example Jupyter kernels built on top of the Callysto framework

    Jupyter Notebook Updated Jun 24, 2016

  • spate Public

    Lightweight Python API for workflow composition and generation

    Python 1 Updated Jun 15, 2016

  • kegg-animate-pathway Public

    Command-line utility to color objects of a KEGG pathway with arbitrary colors

    Python 33 7 Updated Jul 10, 2015

  • biofabric Public

    Python implementation of the BioFabric network visualization technique

    Python 3 1 Other Updated Aug 22, 2013

  • ajmazurie.github.com Public

    Landing page and curriculum vitae of Aurélien Mazurie, Ph.D.

    Updated Jan 10, 2013

  • xweka Public

    Set of command-line tools to automatize the use of the WEKA machine learning toolkit (see README)

    Python 5 MIT License Updated Feb 7, 2012

  • xstats.MINE Public

    Python wrapper for the Java-based Maximal Information-based Nonparametric Exploration (MINE) statistics library

    Python 19 9 Other Updated Feb 3, 2012

  • xbio.SemanticDistance Public

    This Python library provides a method to calculate a distance between terms in an ontology.

    Python 1 MIT License Updated Nov 23, 2011

  • xstats.enrichment Public

    enrichment (subset of the xstats package) is a Python library providing two methods to perform enrichment analysis, such as gene set enrichment analysis in bioinformatics

    Python 1 Other Updated Oct 28, 2011

  • xstats.padjust Public

    padjust (subset of the xstats package) is a Python library to correct p-values for multiple testing

    Python Other Updated Oct 28, 2011