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Commits on Jan 22, 2025

• Add PhILR transformation (microbiome#679)

  TuomasBorman

  authored
  255ac68

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Commits on Jan 18, 2025

• Utilize vegan::rrarefy (microbiome#670)

  TuomasBorman

  authored
  a371208

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Commits on Jan 16, 2025

• Default: update.tree = TRUE, improve tree merging (microbiome#663)

  TuomasBorman

  authored
  37d5b21

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• Incorporate Bioconductor recommendations (microbiome#662)

  TuomasBorman

  authored
  77b6f33

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Commits on Aug 17, 2024

• remove authors from fxns (microbiome#629)

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  Daenarys8

  authored
  dcaa110

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Commits on Aug 13, 2024

• New dissimilarity functions (microbiome#609)

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  3 peopleauthored
  0eb0ebc

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Commits on Jul 23, 2024

• unify param def (microbiome#603)

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  Daenarys8

  and

  TuomasBorman

  authored
  96bddb7

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Commits on Jul 2, 2024

• Fix tree merging (microbiome#588)

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  TuomasBorman

  and

  Daenarys8

  authored
  e62a04e

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Commits on Jun 18, 2024

• Organize parameter names v2 (microbiome#582)

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  Daenarys8

  and

  TuomasBorman

  authored
  5e26bcd

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Commits on Apr 24, 2024

• Deprecate functions *_join (microbiome#515)

  thpral

  authored
  88947bb

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Commits on Apr 3, 2024

• Fix error, notes, and warning based on BiocCheck() (microbiome#469)

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  4 peopleauthored
  889d7fb

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Commits on Oct 27, 2023

• Fix mergeSEs (microbiome#472)

  TuomasBorman

  authored
  20565bb

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Commits on Oct 25, 2023

• mergeSEs fix (microbiome#452)

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  TuomasBorman

  and

  antagomir

  authored
  77adfe5

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Commits on Sep 6, 2023

• loadFromBiom & mergeSEs bugfix (microbiome#436)

  TuomasBorman

  authored
  362a260

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Commits on Jul 21, 2023

• change transformCounts to transformAssay (microbiome#396)

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  ake123

  and

  antagomir

  authored
  660d37b

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Commits on Apr 29, 2023

• SImplify mergeSE (microbiome#359)

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  TuomasBorman

  and

  antagomir

  authored
  fd00193

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Commits on Mar 10, 2023

• assay_name switch (microbiome#341)

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  antagomir

  authored
  4d7d2ce

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Commits on Feb 24, 2023

• mergeSEs: simplify (microbiome#344)

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  TuomasBorman

  and

  antagomir

  authored
  c93b493

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Commits on Dec 19, 2022

• mergeSEs fixes (microbiome#327)

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  TuomasBorman

  authored
  5fe8e0d

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• mergeSEs fix (microbiome#319)

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  TuomasBorman

  authored
  14783bf

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Commits on Aug 26, 2022

• Multiple row/colTrees: fix functions (microbiome#298)

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  TuomasBorman

  authored
  95dda40

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Commits on Aug 9, 2022

• mergeSEs: colnames check (microbiome#290)

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  TuomasBorman

  authored
  87a1078

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Commits on Jul 24, 2022

• mergeSEs fix (microbiome#281)

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  TuomasBorman

  authored
  4f109e7

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Commits on Jul 15, 2022

• Build fix (microbiome#280)

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  TuomasBorman

  authored
  13207f3

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• Merge TreeSEs (microbiome#269)

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  TuomasBorman

  authored
  5da2040

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