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training-material Public
Forked from galaxyproject/training-materialA collection of Galaxy-related training material
HTML MIT License UpdatedDec 15, 2023 -
sgtr Public
Forked from SexGenomicsToolkit/sgtrVisualize population genomics analyses results in R
R GNU General Public License v3.0 UpdatedMar 28, 2023 -
BOSS Public
Forked from bioinfomaticsCSU/BOSSA new algorithm for scaffolding
C++ UpdatedJan 18, 2023 -
galaxy-hub Public
Forked from galaxyproject/galaxy-hubGalaxy Community Hub
HTML UpdatedMar 9, 2022 -
emg-viral-pipeline Public
Forked from EBI-Metagenomics/emg-viral-pipelineVIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies
Python Apache License 2.0 UpdatedFeb 22, 2022 -
Augustus Public
Forked from Gaius-Augustus/AugustusGenome annotation with AUGUSTUS
C++ UpdatedJan 26, 2022 -
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ElConcatenero Public
Forked from ODiogoSilva/ElConcateneroPython GNU General Public License v3.0 UpdatedJun 17, 2021 -
mapping_pipeline Public
Forked from ArimaGenomics/mapping_pipelineMapping pipeline for data generated using Arima-HiC
Perl MIT License UpdatedMay 8, 2021 -
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BRAKER_singularity Public
Forked from qiyubio/BRAKER_singularitySingularity def file template for BRAKER
UpdatedOct 12, 2020 -
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developments-in-next-generation-sequencing Public
Forked from lexnederbragt/developments-in-next-generation-sequencingDevelopments in next generation sequencing: instruments, read lengths, throughput. See
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online-cv Public
Forked from sharu725/online-cvA minimal Jekyll Theme to host your resume (CV)
CSS MIT License UpdatedApr 23, 2019 -
ectocarpus_scripts-1 Public
Forked from koszullab/ectocarpus_scriptsScripts and materials needed to reproduce results and figures in the instaGRAAL showcase paper
Python UpdatedFeb 11, 2019 -
instaGRAAL Public
Forked from koszullab/instaGRAALLarge genome reassembly based on Hi-C data. Continuation of GRAAL Software from Marie-Nelly et al., Nature Communications, 2014 (High-quality genome assembly using chromosomal contact data), and Ma…
Python UpdatedMay 9, 2018 -
biocode Public
Forked from jorvis/biocodeBioinformatics code libraries and scripts
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IonNIPT Public
ThermoFisher Ion Torrent plugin to detect fetal trisomies and estimate fetal fraction
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SCOP Public
Forked from bioinfomaticsCSU/SCOPA novel scaffolding algorithm based on contig classification and optimization
C++ UpdatedMar 12, 2018 -
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wisecondor Public
Forked from VUmcCGP/wisecondorWISECONDOR (WIthin-SamplE COpy Number aberration DetectOR): Detect fetal trisomies and smaller CNV's in a maternal plasma sample using whole-genome data. NEWS: NOW INCLUDES AN INTERACTIVE RESULT BR…
Python GNU General Public License v3.0 UpdatedNov 22, 2016 -
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IonPlotCoverage Public
ThermoFisher Ion Torrent plugin to plot amplicon coverage
Python UpdatedOct 7, 2016 -
sanefalcon Public
Forked from VUmcCGP/sanefalconSANEFALCON (Single reAds Nucleosome-basEd FetAL fraCtiON): Calculating the fetal fraction for noninvasive prenatal testing based on genome-wide nucleosome profiles.
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ion-wisecondor Public
Forked from dridk/ion-wisecondorLife ion torrent plugin using wisecondor
Python GNU General Public License v3.0 UpdatedAug 19, 2016 -
IonCtDNA Public
Ion Torrent plugin to etimate the proportion of circulating tumor DNA in blood samples
Python UpdatedJun 2, 2016