- run "make all" - download and build deps
NOTES
#look at Sam file samtools/samtools view ~/data/NA12878.bam | less #capture read group 1 to new bam file ../samtools/samtools view -b -r 2 ~epeck/data/NA12878.bam > RG2.tagged.bam & #samtools/samtools view -h ~/data/NA12878.bam | grep 'RG:Z:1' | samtools/samtools view -b - > RG1.bam