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R package for quality control of plink genetic datasets

R 58 27 Updated Jan 6, 2025

How to calculate raked propensity scores for the ABCD Study cohort

R 12 4 Updated Feb 4, 2020

Drop down an interactive R or Python console, code editor, and plotting window from the top of your Quarto slides.

TypeScript 174 5 Updated Jul 26, 2024

The Polygenic Score Catalog Calculator is a nextflow pipeline for polygenic score calculation

Nextflow 127 25 Updated Mar 11, 2025

CoMorMent-Containers

R 28 11 Updated Mar 27, 2025

Adding random effects model to the METAL software

C++ 13 3 Updated Jun 11, 2023
C++ 22 9 Updated Jun 30, 2023

GWAS for survival analysis in large cohorts

R 21 10 Updated Jul 24, 2024
R 3 3 Updated Sep 29, 2022

{package} Make beautiful Raincloud plots in R!

R 77 4 Updated Dec 4, 2024

neuroCombat R package

HTML 24 9 Updated Nov 19, 2024
6 1 Updated Jul 4, 2023

R package for retrospective association testing for longitudinal binary traits

R 4 1 Updated Mar 5, 2020

Harmonization of multi-site imaging data with ComBat

R 284 112 Updated Jul 7, 2023

Harmonizing neuroimaging data across scanners and sites

Python 33 13 Updated Jul 18, 2020

Code for manuscript: Neuroanatomical correlates of impulsivity in children aged 9 to 10

R 1 Updated Feb 27, 2020
Julia 13 1 Updated Mar 28, 2025

Lasso method for the estimation of joint genetic effects in GWAS

C++ 9 3 Updated Jan 30, 2020

R library for structural neuroimaging. Provides high-level functions to access (read and write) and visualize surface-based brain morphometry data for individuals and groups.

R 68 13 Updated Nov 27, 2024
HTML 1 Updated Aug 15, 2022

Browser for the results of a gene-PC based pheWAS in the UK Biobank

Jupyter Notebook 5 Updated Jun 8, 2022
C++ 33 7 Updated Aug 25, 2024

Statistical Rethinking Course for Jan-Mar 2023

R 2,259 256 Updated Nov 28, 2023

DeepLoop robustly identifies enhancer-promoter interactions from low-depth and single-cell Hi-C data

Python 31 1 Updated Nov 28, 2022

Moderated Nonlinear Factor Analysis

R 3 3 Updated Feb 11, 2024

Detailed and tailored guide for undergraduate students or anybody want to dig deep into the field of AI with solid foundation.

7,506 1,061 Updated Mar 14, 2024

A tool to build a website to browse hundreds or thousands of GWAS.

Python 169 70 Updated Jul 31, 2024

A web tool for browsing publicly available RNA-seq datasets and derived co-expression networks.

JavaScript 5 1 Updated Aug 6, 2024
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