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Use new docker image why don't ya
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aofarrel committed Dec 28, 2024
1 parent 9463554 commit 92767eb
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2 changes: 1 addition & 1 deletion myco_raw.wdl
Original file line number Diff line number Diff line change
Expand Up @@ -64,7 +64,7 @@ workflow myco {
scatter(paired_fastqs in paired_fastq_sets) {
call clckwrk_combonation.clean_and_decontam_and_check as decontam_each_sample {
input:
docker_image = if decontam_use_CDC_varpipe_ref then "ashedpotatoes/clockwork-plus:v0.12.5.2-CDC" else "ashedpotatoes/clockwork-plus:v0.12.5.1-CRyPTIC",
docker_image = if decontam_use_CDC_varpipe_ref then "ashedpotatoes/clockwork-plus:v0.12.5.3-CDC" else "ashedpotatoes/clockwork-plus:v0.12.5.3-CRyPTIC",
unsorted_sam = true,
force_rename_out = output_sample_name,
reads_files = paired_fastqs,
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