remove unused cpp function

bbimber · Oct 2, 2018 · 943b282 · 943b282
1 parent 397ee71
commit 943b282
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Showing 4 changed files with 0 additions and 33 deletions.
diff --git a/R/RcppExports.R b/R/RcppExports.R
@@ -61,10 +61,6 @@ FastLogVMR <- function(mat, display_progress) {
     .Call('_Seurat_FastLogVMR', PACKAGE = 'Seurat', mat, display_progress)
 }
 
-RowSumOfSquares <- function(x) {
-    .Call('_Seurat_RowSumOfSquares', PACKAGE = 'Seurat', x)
-}
-
 RowVar <- function(x) {
     .Call('_Seurat_RowVar', PACKAGE = 'Seurat', x)
 }

diff --git a/src/RcppExports.cpp b/src/RcppExports.cpp
@@ -205,17 +205,6 @@ BEGIN_RCPP
     return rcpp_result_gen;
 END_RCPP
 }
-// RowSumOfSquares
-NumericVector RowSumOfSquares(const NumericMatrix x);
-RcppExport SEXP _Seurat_RowSumOfSquares(SEXP xSEXP) {
-BEGIN_RCPP
-    Rcpp::RObject rcpp_result_gen;
-    Rcpp::RNGScope rcpp_rngScope_gen;
-    Rcpp::traits::input_parameter< const NumericMatrix >::type x(xSEXP);
-    rcpp_result_gen = Rcpp::wrap(RowSumOfSquares(x));
-    return rcpp_result_gen;
-END_RCPP
-}
 // RowVar
 NumericVector RowVar(Eigen::Map<Eigen::MatrixXd> x);
 RcppExport SEXP _Seurat_RowVar(SEXP xSEXP) {
@@ -301,7 +290,6 @@ static const R_CallMethodDef CallEntries[] = {
     {"_Seurat_SparseRowVar2", (DL_FUNC) &_Seurat_SparseRowVar2, 3},
     {"_Seurat_SparseRowVarStd", (DL_FUNC) &_Seurat_SparseRowVarStd, 5},
     {"_Seurat_FastLogVMR", (DL_FUNC) &_Seurat_FastLogVMR, 2},
-    {"_Seurat_RowSumOfSquares", (DL_FUNC) &_Seurat_RowSumOfSquares, 1},
     {"_Seurat_RowVar", (DL_FUNC) &_Seurat_RowVar, 1},
     {"_Seurat_RunModularityClusteringCpp", (DL_FUNC) &_Seurat_RunModularityClusteringCpp, 9},
     {"_Seurat_ComputeSNN", (DL_FUNC) &_Seurat_ComputeSNN, 2},

diff --git a/src/data_manipulation.cpp b/src/data_manipulation.cpp
@@ -373,22 +373,6 @@ Eigen::VectorXd FastLogVMR(Eigen::SparseMatrix<double> mat,  bool display_progre
   return(rowdisp);
 }
 
-/* Calculates the row sums of squared values without using additional memory */
-//[[Rcpp::export]]
-NumericVector RowSumOfSquares(const NumericMatrix x){
-  int nrow = x.nrow(), ncol = x.ncol();
-  NumericVector out(nrow);
-
-  for (int i = 0; i < nrow; i++) {
-    double total = 0;
-    for (int j = 0; j < ncol; j++) {
-      total += pow(x(i, j), 2);
-    }
-    out[i] = total;
-  }
-  return out;
-}
-
 /* Calculates the variance of rows of a matrix */
 //[[Rcpp::export]]
 NumericVector RowVar(Eigen::Map<Eigen::MatrixXd> x){

diff --git a/src/data_manipulation.h b/src/data_manipulation.h
@@ -44,7 +44,6 @@ NumericVector SparseRowVarStd(Eigen::SparseMatrix<double> mat,
                               NumericVector sd,
                               double vmax,
                               bool display_progress);
-NumericVector RowSumOfSquares(const NumericMatrix x);
 NumericVector RowVar(Eigen::Map<Eigen::MatrixXd> x);
 //----------------------------------------------------