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belowlab

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  1. ldsc ldsc Public

    Forked from bulik/ldsc

    LD Score Regression (LDSC)

    HTML 10 7

  2. IMMerge IMMerge Public

    Tool to merge VCF genotype files at scale

    Python 9 6

  3. shapeit4 shapeit4 Public

    Forked from odelaneau/shapeit4

    Segmented HAPlotype Estimation and Imputation Tool

    C++ 1 1

  4. ukbb-phecode-mapping ukbb-phecode-mapping Public

    Snakemake pipeline for reproducibly mapping the ICD codes in UK Biobank datasets to Phecodes

    Python 1

  5. tnprc-pedigrees tnprc-pedigrees Public

    Pedigree structures for "Pedigree reconstruction and distant pairwise kinship estimation from genome sequence data: A demonstration in a population of rhesus macaques (Macaca mulatta)"

    Shell

  6. primus_v190 primus_v190 Public

    Perl

Repositories

Showing 10 of 56 repositories
  • ldsc Public Forked from bulik/ldsc

    LD Score Regression (LDSC)

    belowlab/ldsc’s past year of commit activity
    HTML 10 GPL-3.0 352 0 0 Updated Dec 16, 2024
  • drive Public Forked from jtb324/IBDCluster

    A cli tool to analyze ibd sharing for a specific locus for multiple phenotypes

    belowlab/drive’s past year of commit activity
    Python 0 Apache-2.0 1 0 0 Updated Dec 16, 2024
  • CCHC_proteomics_QC Public

    QC of CCHC proteomics batch2

    belowlab/CCHC_proteomics_QC’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Nov 12, 2024
  • unified-simulations Public

    Updated simulation code packaged with all of its dependencies.

    belowlab/unified-simulations’s past year of commit activity
    Perl 0 0 0 0 Updated Nov 1, 2024
  • compadre Public

    IBD-based pedigree generation software, built on top of and maximizing utility from the tools PRIMUS and ERSA

    belowlab/compadre’s past year of commit activity
    Perl 0 0 1 1 Updated Oct 22, 2024
  • bioindex-client Public

    Gets gene associations from Bioindex

    belowlab/bioindex-client’s past year of commit activity
    Python 0 0 0 0 Updated Oct 18, 2024
  • compadre-website Public
    belowlab/compadre-website’s past year of commit activity
    HTML 0 0 0 0 Updated Oct 1, 2024
  • rShiny_Bias Public Forked from Lbreidenbach/rShiny_Bias
    belowlab/rShiny_Bias’s past year of commit activity
    R 0 1 0 0 Updated Sep 19, 2024
  • hap-ibd Public Forked from browning-lab/hap-ibd

    The hap-ibd program detects identity-by-descent segments in phased genotype data.

    belowlab/hap-ibd’s past year of commit activity
    Java 0 9 0 0 Updated Sep 16, 2024
  • McBias Public Forked from Lbreidenbach/McBias

    McBias is an r package designed to help estimate the effects of bias found in large datasets of convenience

    belowlab/McBias’s past year of commit activity
    R 0 1 0 0 Updated Sep 11, 2024
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