Interactive Knowledge Extraction tool

Open source code for AlphaFold.

Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Interactively analyze single cell genomic data

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

PyTorch 官方中文教程包含 60 分钟快速入门教程，强化教程，计算机视觉，自然语言处理，生成对抗网络，强化学习。欢迎 Star，Fork！

Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"

mRNA Sequence Design Using Optimization Techniques

Pacemaker command line interface and GUI

Scripts to copy rocks roll isos to a generic webserver for local hosting

Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.

annovarR: a variant annotation and visualization system based on R and Shiny framework

📚 技术面试必备基础知识、Leetcode 题解、后端面试、Java 面试、春招、秋招、操作系统、计算机网络、系统设计

⭐️ Markdown 简历模版

Data science Python notebooks: Deep learning (TensorFlow, Theano, Caffe, Keras), scikit-learn, Kaggle, big data (Spark, Hadoop MapReduce, HDFS), matplotlib, pandas, NumPy, SciPy, Python essentials,…

Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecule Sequencing

An Artificial Neural Network-based discriminator for validating clinically significant genomic variants

Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

Fast HLA type inference from whole-genome data

use numpy, scipy, and tensorflow to implement these basic ML model and learning algorithm

Tools for working with SAM/BAM/CRAM data

A Fast and All-in-one Preprocessor for FastQ files

Generate consensus reads to reduce sequencing noises

WASP: allele-specific pipeline for unbiased read mapping and molecular QTL discovery

Machine Learning in Action（机器学习实战）

Biobakery formulae for the Homebrew package manager

de novo virus assembler of Illumina paired reads

Quantification of transplant-derived circulating cell-free DNA in absence of a donor genotype

Kraken taxonomic sequence classification system