Boab2
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IGV-snapshot-automator
IGV-snapshot-automator PublicForked from stevekm/IGV-snapshot-automator
Script to automatically create and run IGV snapshot batchscripts
Python
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igv-reports
igv-reports PublicForked from igvteam/igv-reports
Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.
Python
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DNABERT
DNABERT PublicForked from jerryji1993/DNABERT
DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome
Python
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DNABERT_2
DNABERT_2 PublicForked from MAGICS-LAB/DNABERT_2
[ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome
Shell
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ABC-Enhancer-Gene-Prediction
ABC-Enhancer-Gene-Prediction PublicForked from broadinstitute/ABC-Enhancer-Gene-Prediction
Cell type specific enhancer-gene predictions using ABC model (Fulco, Nasser et al, Nature Genetics 2019)
Python
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SISSIz
SISSIz PublicForked from ViennaRNA/SISSIz
SISSIz: Dinucleotide controlled random alignments and RNA gene prediction
C
Repositories
- ABC-Enhancer-Gene-Prediction Public Forked from broadinstitute/ABC-Enhancer-Gene-Prediction
Cell type specific enhancer-gene predictions using ABC model (Fulco, Nasser et al, Nature Genetics 2019)
boab2/ABC-Enhancer-Gene-Prediction’s past year of commit activity - DNABERT_2 Public Forked from MAGICS-LAB/DNABERT_2
[ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome
boab2/DNABERT_2’s past year of commit activity - igv-reports Public Forked from igvteam/igv-reports
Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.
boab2/igv-reports’s past year of commit activity - DNABERT Public Forked from jerryji1993/DNABERT
DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome
boab2/DNABERT’s past year of commit activity - ENCODE_CRISPR_data Public Forked from argschwind/ENCODE_CRISPR_data
Re-analyze and harmonize Gasperini et al., 2019, Schraivogel et al., 2020 and Nasser et al., 2021 data for ENCODE distal regulation E-G benchmarking
boab2/ENCODE_CRISPR_data’s past year of commit activity - IGV-snapshot-automator Public Forked from stevekm/IGV-snapshot-automator
Script to automatically create and run IGV snapshot batchscripts
boab2/IGV-snapshot-automator’s past year of commit activity - SISSIz Public Forked from ViennaRNA/SISSIz
SISSIz: Dinucleotide controlled random alignments and RNA gene prediction
boab2/SISSIz’s past year of commit activity
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