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CRAN Task View: High-Performance and Parallel Computing with R

23 5 Updated Jan 15, 2025

Breeding and Genetics course

HTML 4 Updated Jun 6, 2023

Tidy Plots for Scientific Papers

R 377 11 Updated Jan 15, 2025

Stochastic-Lanczos-Expedited Mixed Models

C++ 10 2 Updated Aug 23, 2024

Fortran library to handle sparse matrices

Fortran 19 2 Updated Jan 9, 2025

Data Apps & Dashboards for Python. No JavaScript Required.

Python 21,816 2,095 Updated Jan 17, 2025
Julia 2 1 Updated Apr 15, 2024

Imputation via haplotype blocks

R 4 Updated Sep 21, 2022

R-package: Calculation of haplotype blocks and libraries

R 30 2 Updated Mar 12, 2024

An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..

R 767 158 Updated Aug 4, 2024

R Debugger Extension for Visual Studio Code

TypeScript 173 11 Updated Sep 8, 2024
Fortran 2 Updated Nov 7, 2024

Collection of awesome LLM apps with AI Agents and RAG using OpenAI, Anthropic, Gemini and opensource models.

Python 12,829 1,381 Updated Jan 18, 2025

Fast Python/Cython implementation of the PCAone Halko algorithm

Python 2 Updated Jan 14, 2025

Software for ancestry estimation in unrelated individuals

Python 15 Updated Jan 14, 2025

A set of tutorials for msprime and tskit.

Jupyter Notebook 20 15 Updated Dec 12, 2024

A repo of short "vignettes" illustrating statistical concepts

HTML 303 86 Updated Mar 4, 2024

Deregression based on Garrick et al. (2009). With pedigree and files containing EBVs, Deregression is undertaken and deregressed EVC, deregressed reliabilities and weights are outputted.

R 4 4 Updated Jul 10, 2016
R 1 Updated Jun 10, 2024

A complete pipeline for metagenomic analysis

C 392 81 Updated Jan 6, 2025

Call LLM APIs from R

R 281 38 Updated Jan 17, 2025

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

JavaScript 12,992 45,089 Updated Dec 30, 2024
Python 40 10 Updated Jan 16, 2025

Gitmoji tool for git commit messages in VSCode

TypeScript 278 30 Updated Jun 5, 2024

The local version of high-definition likelihood inference of genetic correlations (HDL-L)

R 9 Updated Jan 17, 2025

Inbreeding and Numerator Relationship Coefficients

R 1 Updated Sep 16, 2024

igraph R package

R 571 203 Updated Jan 16, 2025

sHDL

R 5 Updated Oct 8, 2024

High-definition likelihood inference of genetic correlations (HDL)

R 101 29 Updated Jan 16, 2025
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