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compare sequences to a shared root reference sequence.
VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.
nextflow-io / nf-validation
Forked from nextflow-io/nf-schemaParams validation plugin for Nextflow pipelines
Intelligent adaptive brightness for your external monitors
Slim(toolkit): Don't change anything in your container image and minify it by up to 30x (and for compiled languages even more) making it secure too! (free and open source)
A small set of Python functions to draw pretty maps from OpenStreetMap data. Based on osmnx, matplotlib and shapely libraries.
Extension for Jupyter which integrates igv.js
Module for embedding igv.js in an IPython notebook
An NGS read trimming tool that is specific, sensitive, and speedy. (production)
One place for service teams to find styles, components and patterns for designing government services.
The U.S. Web Design System helps the federal government build fast, accessible, mobile-friendly websites.
Produce taxonomic and functional annotations of shotgun metagenomes, metatranscriptomes and metaproteome sequences.
Toolkit for calling structural variants using short or long reads
A list of interesting genome browser and genome visualization programs
using all the bits for echt rapid variant annotation and filtering
Python library for extracting HPO encoded phenotypes from text
The leading data integration platform for ETL / ELT data pipelines from APIs, databases & files to data warehouses, data lakes & data lakehouses. Both self-hosted and Cloud-hosted.
A JavaScript implementation of Amazon Ion.
A python library and command-line client for file storage on OSF
A feature-rich command-line audio/video downloader
Framework for building fast genomics web tools with WebAssembly and WebWorkers
DeepConsensus uses gap-aware sequence transformers to correct errors in Pacific Biosciences (PacBio) Circular Consensus Sequencing (CCS) data.
Nextflow implementation of STRling data flow