主要更新控制中心的代码，使其可以对一个apk进行加固。把jni的存放目录移动了一个位置。

AdvmpTest/jni/Android.mk

@@ -1 +1,26 @@
-include $(call all-subdir-makefiles)
+ADVMPC_PATH := ../../template/jni/advmpc
+
+LOCAL_PATH := $(call my-dir)
+
+include $(CLEAR_VARS)
+
+LOCAL_MODULE    := advmpc
+
+LOCAL_C_INCLUDES := $(ADVMPC_PATH)
+
+LOCAL_SRC_FILES := $(ADVMPC_PATH)/ioapi.c \
+				   $(ADVMPC_PATH)/unzip.c \
+				   $(ADVMPC_PATH)/Globals.cpp \
+				   $(ADVMPC_PATH)/avmp.cpp \
+				   $(ADVMPC_PATH)/BitConvert.cpp \
+				   $(ADVMPC_PATH)/InterpC.cpp \
+				   $(ADVMPC_PATH)/io.cpp \
+				   $(ADVMPC_PATH)/Utils.cpp \
+				   $(ADVMPC_PATH)/YcFile.cpp 
+
+LOCAL_SRC_FILES += $(ADVMPC_PATH)/DexOpcodes.cpp \
+				   $(ADVMPC_PATH)/Exception.cpp
+
+LOCAL_LDLIBS := -llog -lz
+
+include $(BUILD_SHARED_LIBRARY)

base/src/main/java/buwai/android/dexlib2/helper/MethodHelper.java

@@ -21,6 +21,9 @@
  */
 public class MethodHelper {
 
+    public static final String[] paramNames = { "a", "b", "c", "d", "e", "f", "g", "h", "i", "j", "k", "l", "m", "n",
+            "o", "p", "q", "r", "s", "t", "u", "v", "w", "x", "y", "z" };
+
     /**
      * 在起始位置插入指令。
      * @param method 方法对象。
@@ -128,4 +131,79 @@ public static String genParamsShortDesc(MethodReference mr) {
         return sb.toString();
     }
 
+    /**
+     * 生成在native中的类型。
+     * @param mr
+     * @return
+     */
+    public static String genTypeInNative (MethodReference mr) {
+        String type = mr.getReturnType();
+        return genTypeInNative(type);
+    }
+
+    /**
+     * 生成在native中的类型。
+     * @param type
+     * @return
+     */
+    public static String genTypeInNative (CharSequence type) {
+        char cType = type.charAt(0);
+        switch (cType) {
+            case 'V':
+                return "void";
+            case 'Z':
+                return "jboolean";
+            case 'B':
+                return "jbyte";
+            case 'S':
+                return "jshort";
+            case 'C':
+                return "jchar";
+            case 'I':
+                return "jint";
+            case 'J':
+                return "jlong";
+            case 'F':
+                return "jfloat";
+            case 'D':
+                return "jdouble";
+            case 'L':
+                return "jobject";
+            case '[':
+                return "jobject";
+            default:
+                return null;
+        }
+    }
+
+    /**
+     * 生成JNI方法参数列表。
+     *
+     * @param mr
+     * @return 返回方法参数列表。
+     */
+    public static String genParamTypeListInNative(MethodReference mr) {
+        List<? extends CharSequence> params = mr.getParameterTypes();
+        StringBuilder paramsList = new StringBuilder();
+        paramsList.append("JNIEnv *env, jobject thiz");
+        int length = params.size();
+
+        for (int i = 0; i < length; i++) {
+            paramsList.append(", ");
+            paramsList.append(genTypeInNative(mr));
+            paramsList.append(" ");
+            paramsList.append(paramNames[i]);
+        }
+        return paramsList.toString();
+    }
+
+    /**
+     * 生成JNINativeMethod结构的数据。
+     * @param method
+     * @return
+     */
+    public static String genJNINativeMethod(Method method) {
+        return String.format("{ \"%s\", \"%s\", (void*)%s }, ", method.getName(), genMethodSig(method), method.getName());
+    }
+
 }

base/src/main/java/buwai/android/shell/base/Utils.java

@@ -1,9 +1,54 @@
 package buwai.android.shell.base;
 
+import java.io.*;
+
 /**
  * Created by buwai on 25/4/1.
  */
 public class Utils {
 
+    /**
+     * 复制整个文件夹内容
+     *
+     * @param oldPath String 原文件路径 如：c:/fqf
+     * @param newPath String 复制后路径 如：f:/fqf/ff
+     * @return boolean
+     */
+    public static void copyFolder(String oldPath, String newPath) throws IOException {
+
+        (new File(newPath)).mkdirs(); // 如果文件夹不存在 则建立新文件夹
+        File a = new File(oldPath);
+        String[] file = a.list();
+        File temp = null;
+
+        for (int i = 0; i < file.length; i++) {
+            if (oldPath.endsWith(File.separator)) {
+                temp = new File(oldPath + file[i]);
+            } else {
+                temp = new File(oldPath + File.separator + file[i]);
+            }
+
+            if (temp.isFile()) {
+                try (FileInputStream input = new FileInputStream(temp);
+                     FileOutputStream output = new FileOutputStream(newPath
+                        + "/" + (temp.getName()).toString())) {
+
+                    byte[] b = new byte[1024 * 5];
+                    int len;
+                    while ((len = input.read(b)) != -1) {
+                        output.write(b, 0, len);
+                    }
+                    output.flush();
+                    output.close();
+                    input.close();
+                }
+            }
+            if (temp.isDirectory()) {// 如果是子文件夹
+                copyFolder(oldPath + "/" + file[i], newPath + "/" + file[i]);
+            }
+        }
+
+
+    }
 
 }

base/src/main/java/buwai/android/shell/base/ZipHelper.java

@@ -14,37 +14,31 @@ public class ZipHelper {
      * 解压缩zip文件中的单个文件。
      *
      * @param file     file zip文件。
-     * @param outDir   被解压缩文件的输出目录。
+     * @param outPath   输出路径。
      * @param filename 要解压缩的文件名。
      */
-    public static void unZipSingle(File file, File outDir, String filename) {
+    public static void unZipSingle(File file, File outPath, String filename) throws IOException {
         try (ZipFile zipFile = new ZipFile(file)) {
             ZipEntry entry = zipFile.getEntry(filename);//所解压的文件名
-            try (InputStream input = zipFile.getInputStream(entry); OutputStream output = new FileOutputStream(outDir)) {
+            try (InputStream input = zipFile.getInputStream(entry); OutputStream output = new FileOutputStream(outPath)) {
                 int temp = 0;
                 while ((temp = input.read()) != -1) {
                     output.write(temp);
                 }
             }
-        } catch (Exception e) {
-            e.printStackTrace();
         }
     }
 
     /**
      * 压缩单个文件
      */
-    public static void doZipSingle(File zipFile, File file) {
-        try {
-            try (InputStream input = new FileInputStream(file); ZipOutputStream zipOut = new ZipOutputStream(new FileOutputStream(zipFile));) {
-                zipOut.putNextEntry(new ZipEntry(file.getName()));
-                int temp = 0;
-                while ((temp = input.read()) != -1) {
-                    zipOut.write(temp);
-                }
+    public static void doZipSingle(File zipFile, File file) throws IOException {
+        try (InputStream input = new FileInputStream(file); ZipOutputStream zipOut = new ZipOutputStream(new FileOutputStream(zipFile));) {
+            zipOut.putNextEntry(new ZipEntry(file.getName()));
+            int temp = 0;
+            while ((temp = input.read()) != -1) {
+                zipOut.write(temp);
             }
-        } catch (Exception e) {
-            e.printStackTrace();
         }
     }
 

base/src/main/java/buwai/android/shell/base/helper/TypeDescriptionHelper.java

@@ -198,6 +198,9 @@ private static boolean isMatchPackage(String packageNameInList, String packageNa
      * @return true: 包含。false: 不包含。
      */
     public static boolean isMatchMethodInWhiteList(List<TypeDescription> list, TypeDescription typeDescription) {
+        if (0 == list.size()) {
+            return true;
+        }
         for (TypeDescription td : list) {
             if (null == td.methodName) {
                 return true;
@@ -217,6 +220,9 @@ public static boolean isMatchMethodInWhiteList(List<TypeDescription> list, TypeD
     }
 
     public static boolean isMatchMethodInBlackList(List<TypeDescription> list, TypeDescription typeDescription) {
+        if (0 == list.size()) {
+            return false;
+        }
         for (TypeDescription td : list) {
             if (null == td.methodName) {
                 return false;

control-centre/pom.xml

@@ -19,9 +19,15 @@
             <artifactId>base</artifactId>
             <version>1.0.0-SNAPSHOT</version>
         </dependency>
+        <dependency>
+            <groupId>buwai.android.shell</groupId>
+            <artifactId>separator</artifactId>
+            <version>1.0.0-SNAPSHOT</version>
+        </dependency>
     </dependencies>
 
     <build>
+        <finalName>buwaishell</finalName>
         <plugins>
             <plugin>
                 <groupId>org.apache.maven.plugins</groupId>

control-centre/src/main/java/buwai/android/shell/controlcentre/ControlCentre.java

@@ -1,43 +1,101 @@
 package buwai.android.shell.controlcentre;
 
+import buwai.android.shell.base.TypeDescription;
+import buwai.android.shell.base.Utils;
 import buwai.android.shell.base.ZipHelper;
+import buwai.android.shell.base.helper.AndroidManifestHelper;
+import buwai.android.shell.separator.InstructionInsert01;
+import buwai.android.shell.separator.Separator;
+import buwai.android.shell.separator.SeparatorOption;
 
 import java.io.File;
 import java.io.IOException;
-import java.nio.file.Files;
 
 /**
  * Created by Neptunian on 2015/4/1.
  */
 public class ControlCentre {
 
-    private File mApkFile;
-    private File mOutDir;
-    private File mWorkspace;
+    private ControlCentreOption mOpt;
+    private File mApkUnpackDir;
 
-    public ControlCentre(File src, File outDir) throws IOException {
-        mApkFile = src;
-        mOutDir = outDir;
+    public ControlCentre(ControlCentreOption opt) throws IOException {
+        mOpt = opt;
         prepare();
     }
 
     /**
      * 做一些准备工作。
      */
     private void prepare() throws IOException {
-        // 创建工作目录。
-        mWorkspace = Files.createTempDirectory(mOutDir.toPath(), "advmp").toFile();
+        mApkUnpackDir = new File(mOpt.workspace, "apk");
+        mApkUnpackDir.mkdir();
 
         // 解压缩apk中的classes.dex文件。
-        ZipHelper.unZipSingle(mApkFile, mWorkspace, "classes.dex");
+        ZipHelper.unZipSingle(mOpt.apkFile, new File(mApkUnpackDir, "classes.dex"), "classes.dex");
+
+        // 解压缩apk中的AndroidManifest.xml文件。
+        ZipHelper.unZipSingle(mOpt.apkFile, new File(mApkUnpackDir, "AndroidManifest.xml"), "AndroidManifest.xml");
     }
 
     /**
      * 加壳。
      * @return
      */
-//    public boolean shell() {
-//
-//    }
+    public boolean shell() {
+        boolean bRet = false;
+        try {
+            // 插入指令。
+            TypeDescription classDesc = AndroidManifestHelper.findFirstClass(new File(mApkUnpackDir, "AndroidManifest.xml"));
+            InstructionInsert01 instructionInsert01 = new InstructionInsert01(new File(mApkUnpackDir, "classes.dex"), classDesc);
+            instructionInsert01.insert();
+
+            runSeparator();
+
+            copyJniFiles();
+
+
+
+            bRet = true;
+        } catch (IOException e) {
+            e.printStackTrace();
+        }
+        return bRet;
+    }
+
+    /**
+     * 运行抽取器。
+     * @return
+     * @throws IOException
+     */
+    private boolean runSeparator() throws IOException {
+        SeparatorOption opt = new SeparatorOption();
+        opt.dexFile = new File(mApkUnpackDir, "classes.dex");
+        File outDir = new File(mOpt.workspace, "separator");
+        opt.outDexFile = new File(outDir, "classes.dex");
+        opt.outYcFile = new File(outDir, "classes.yc");
+        opt.outCPFile = new File(outDir, "advmp_separator.cpp");
+
+        Separator separator = new Separator(opt);
+        return separator.run();
+    }
+
+    /**
+     * 将template中的jni目录拷贝到工作目录。
+     * @throws IOException
+     */
+    private void copyJniFiles() throws IOException {
+        // TODO 这里写死了。
+        File jniTemplateDir = new File("E:\\MyProjects\\ADVMP\\template\\jni");
+        mOpt.jniDir = new File(mOpt.workspace, "jni");
+        Utils.copyFolder(jniTemplateDir.getAbsolutePath(), mOpt.jniDir.getAbsolutePath());
+    }
+
+    /**
+     * 更新jni目录中的文件。
+     */
+    private void updateJniFiles() {
+        File file = new File(mOpt.jniDir.getAbsolutePath() + File.separator + )
+    }
 
 }