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@bzhanglab

Zhang Lab

Translating omics data into biological insights.

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  1. OmicsEV OmicsEV Public

    A tool for large scale omics datasets evaluation

    R 24 4

  2. WebGestaltR WebGestaltR Public

    R package for WebGestalt

    R 34 13

  3. sumer sumer Public

    SUmmarizing Multiple Enrichment analysis Results

    R 8 4

  4. neoflow neoflow Public

    NeoFlow: a proteogenomics pipeline for neoantigen discovery

    Nextflow 22 12

  5. NetSAM NetSAM Public

    Network Seriation And Modularization R package

    R 3 3

Repositories

Showing 10 of 43 repositories
  • funmap Public

    generate gene co-function networks using omics data

    bzhanglab/funmap’s past year of commit activity
    Python 5 MIT 2 1 1 Updated Dec 17, 2024
  • nf-docker Public

    docker files for pipeline steps

    bzhanglab/nf-docker’s past year of commit activity
    R 0 0 0 0 Updated Dec 16, 2024
  • CoPheeMap Public

    Co-regulation map of phosphosites

    bzhanglab/CoPheeMap’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Dec 10, 2024
  • WebGestaltR Public

    R package for WebGestalt

    bzhanglab/WebGestaltR’s past year of commit activity
    R 34 13 16 1 Updated Nov 21, 2024
  • neoflow Public

    NeoFlow: a proteogenomics pipeline for neoantigen discovery

    bzhanglab/neoflow’s past year of commit activity
    Nextflow 22 12 9 0 Updated Nov 16, 2024
  • sumer Public

    SUmmarizing Multiple Enrichment analysis Results

    bzhanglab/sumer’s past year of commit activity
    R 8 4 0 0 Updated Nov 14, 2024
  • DeepVEP Public
    bzhanglab/DeepVEP’s past year of commit activity
    Python 1 0 0 0 Updated Sep 12, 2024
  • webgestaltpy Public

    Python package for WebGestalt

    bzhanglab/webgestaltpy’s past year of commit activity
    Rust 1 GPL-3.0 0 1 0 Updated Aug 16, 2024
  • AutoRT Public

    AutoRT: Peptide retention time prediction using deep learning

    bzhanglab/AutoRT’s past year of commit activity
    Jupyter Notebook 26 GPL-3.0 7 1 0 Updated Jul 31, 2024
  • neoflow2 Public
    bzhanglab/neoflow2’s past year of commit activity
    Nextflow 0 0 0 0 Updated Jul 22, 2024
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