Convert amino acid sequence to nucleotide sequence
Based off of this MatLab program, but re-written in Python.
seqNuc = aa2nt(secAA)
| parameter | value |
|---|---|
seqAA |
String of one-letter amino acid codes to be converted to bases. For acceptable codes, see Amino Acid Codes |
| argument | value |
|---|---|
seqNuc |
String of one-letter nucleotide base codes. |
| Amino Acid | One-letter code |
|---|---|
| Alanine | A |
| Arginine | R |
| Asparagine | N |
| Aspartic acid (Aspartate) | D |
| Cysteine | C |
| Glutamine | Q |
| Glutamic acid (Glutamate) | E |
| Glycine | G |
| Histidine | H |
| Isoleucine | I |
| Leucine | L |
| Lysine | K |
| Methionine | M |
| Phenylalanine | F |
| Proline | P |
| Serine | S |
| Threonine | T |
| Tryptophan | W |
| Tyrosine | Y |
| Valine | V |
| Asparagine or Aspartic acid (Aspartate) | B |
| Glutamine or Glutamic acid (Glutamate) | Z |
| Unknown amino acid | X |
| Translation stop | * |
| Gap | - |
| Other |