Set to version 0.1.9

Dockerfile

@@ -1,6 +1,6 @@
 FROM quay.io/kmayerb/miniconda3:0.0.2
 
-RUN pip install git+https://github.com/kmayerb/[email protected].8
+RUN pip install git+https://github.com/kmayerb/[email protected].9
 
 RUN pip install python-levenshtein==0.12.0
 RUN pip install pytest

README.md

@@ -19,14 +19,14 @@ pip install tcrdist3
 or 
 
 ```
-pip install git+https://github.com/kmayerb/[email protected].8
+pip install git+https://github.com/kmayerb/[email protected].9
 ```
 
 ## Docker
 [![Docker Repository on Quay](https://quay.io/repository/kmayerb/tcrdist3/status "Docker Repository on Quay")](https://quay.io/repository/kmayerb/tcrdist3)
 
 ```
-docker pull quay.io/kmayerb/tcrdist3:0.1.8
+docker pull quay.io/kmayerb/tcrdist3:0.1.9
 ```
 
 ## Documentation
@@ -56,7 +56,7 @@ tr.pw_cdr3_b_aa
 
 ##### TCR meta-clonotypes for biomarker discovery with tcrdist3: quantification of public, HLA-restricted TCR biomarkers of SARS-CoV-2 infection
 
-Mayer-Blackwell K, Schattgen S, Cohen-Lavi L, Crawford JC, Souquette A, Gaevert JA, Hertz T, Thomas PG, Bradley PH, Fiore-Gartland A. 2020. bioRxiv doi:10.1101/2020.12.24.424260
+Mayer-Blackwell K, Schattgen S, Cohen-Lavi L, Crawford JC, Souquette A, Gaevert JA, Hertz T, Thomas PG, Bradley PH, Fiore-Gartland A. [bioRxiv (2020)](https://www.biorxiv.org/content/10.1101/2020.12.24.424260v1).
 
 
 ##### Quantifiable predictive features define epitope-specific T cell receptor repertoires

docs/docker.rst

@@ -18,7 +18,7 @@ Pull the image:
 
 .. code-block:: none
     
-    docker pull quay.io/kmayerb/tcrdist3:0.1.8
+    docker pull quay.io/kmayerb/tcrdist3:0.1.9
 
 
 Running a Container
@@ -29,7 +29,7 @@ Run a container iteractively (flag `-it`):
 
 .. code-block:: none
     
-    docker run -it quay.io/kmayerb/tcrdist3:0.1.8
+    docker run -it quay.io/kmayerb/tcrdist3:0.1.9
 
 
 The tcrdist3 image runs Python 3.7.6 and IPython, so the fastest way to try things out

setup.py

@@ -17,7 +17,7 @@
             license='MIT',
             author='Koshlan Mayer-Blackwell',
             author_email='[email protected]',
-            version='0.1.8',
+            version='0.1.9',
             packages=PACKAGES,
             package_data={"": ["*.csv","*.tsv","*.txt"]},
            )