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transIndel Public
Indel caller for DNA-seq or RNA-seq
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liftOverBedpe Public
This is the script to liftover bedpe files
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ARSER Public
Periodicity detection algorithm for evenly spaced circadian gene expression data
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nanoseq Public
Forked from nf-core/nanoseqNanopore demultiplexing, QC and alignment pipeline
Nextflow MIT License UpdatedJan 10, 2022 -
d2l-zh Public
Forked from d2l-ai/d2l-zh《动手学深度学习》：面向中文读者、能运行、可讨论。中英文版被55个国家的300所大学用于教学。
Python Apache License 2.0 UpdatedDec 22, 2021 -
statistic Public
Forked from Kensuke-Hinata/statisticcollecting books, papers and docs.
UpdatedDec 12, 2021 -
awesome-nanopore Public
Forked from GoekeLab/awesome-nanoporeA curated list of awesome nanopore analysis tools.
MIT License UpdatedNov 10, 2021 -
pytorch-handbook Public
Forked from zergtant/pytorch-handbookpytorch handbook是一本开源的书籍，目标是帮助那些希望和使用PyTorch进行深度学习开发和研究的朋友快速入门，其中包含的Pytorch教程全部通过测试保证可以成功运行
Jupyter Notebook UpdatedOct 25, 2021 -
deepconsensus Public
Forked from google/deepconsensusDeepConsensus uses gap-aware sequence transformers to correct errors in Pacific Biosciences (PacBio) Circular Consensus Sequencing (CCS) data.
Python BSD 3-Clause "New" or "Revised" License UpdatedSep 1, 2021 -
Badread Public
Forked from rrwick/Badreada long read simulator that can imitate many types of read problems
Python GNU General Public License v3.0 UpdatedMar 15, 2021 -
plain-academic Public
Forked from mavroudisv/plain-academicA truly simple website template for academics
HTML BSD 2-Clause "Simplified" License UpdatedFeb 20, 2021 -
sequenceTubeMap Public
Forked from vgteam/sequenceTubeMapdisplays multiple genomic sequences in the form of a tube map
JavaScript MIT License UpdatedJul 30, 2020 -
DeepLearning-500-questions Public
Forked from scutan90/DeepLearning-500-questions深度学习500问，以问答形式对常用的概率知识、线性代数、机器学习、深度学习、计算机视觉等热点问题进行阐述，以帮助自己及有需要的读者。 全书分为18个章节，50余万字。由于水平有限，书中不妥之处恳请广大读者批评指正。 未完待续............ 如有意合作，联系[email protected] 版权所有，违权必究 Tan 2018.06
GNU General Public License v3.0 UpdatedMar 3, 2020 -
DeepLearning Public
Forked from Mikoto10032/DeepLearning深度学习入门教程&&优秀文章&&Deep Learning Tutorial
Jupyter Notebook Apache License 2.0 UpdatedDec 5, 2019 -
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gsir-te Public
Forked from eddelbuettel/gsir-teGetting Started in R -- Tinyverse Edition
TeX GNU General Public License v3.0 UpdatedOct 8, 2018 -
awesome-single-cell Public
Forked from seandavi/awesome-single-cellList of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
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deeplift Public
Forked from kundajelab/deepliftPublic facing deeplift repo
Python MIT License UpdatedJul 4, 2018 -
ScanIndel Public
The integrated pipeline for Indel detection
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pyGenomeTracks Public
Forked from deeptools/pyGenomeTrackspython module to plot beautiful and highly customizable genome browser tracks
Python GNU General Public License v3.0 UpdatedMar 10, 2018 -
The-world-of-faculty Public
Forked from crazyhottommy/The-world-of-facultyresources for faculty
MIT License UpdatedFeb 26, 2018 -
An-Introduction-To-Applied-Bioinformatics Public
Forked from applied-bioinformatics/An-Introduction-To-Applied-BioinformaticsInteractive lessons in bioinformatics.
Python Other UpdatedJan 22, 2018 -
rnaseq_tutorial Public
Forked from griffithlab/rnaseq_tutorialInformatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file form…
R Other UpdatedJan 22, 2018 -
mosdepth Public
Forked from brentp/mosdepthfast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing
Nim MIT License UpdatedNov 1, 2017 -
biotools Public
Forked from jdidion/biotoolsA list of useful bioinformatics resources
UpdatedOct 1, 2017 -
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karyoploteR Public
Forked from bernatgel/karyoploteRkaryoploteR - An R/Bioconductor package to plot arbitrary data along the genome
R UpdatedJun 12, 2017 -
deeplearning-biology Public
Forked from hussius/deeplearning-biologyA list of deep learning implementations in biology
UpdatedApr 13, 2017