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Commits on Jan 4, 2021

• Fix naming errors in notebook

  Show description for 37e555c
  cflerin

  committed
  37e555c

Commits on Aug 17, 2020

• Added actions workflow for Nextflow test dataset

  cflerin

  committed
  cd23f7b

Commits on Jun 24, 2020

• Added doi to readme

  cflerin

  committed
  cd2aed2

Commits on Jun 9, 2020

• Documentation updates

  cflerin

  committed
  b3569c8

Commits on Jun 8, 2020

• Updated main figure

  cflerin

  committed
  e846ad8

Commits on May 18, 2020

• Add garnett cell type classifications

  cflerin

  committed
  a1c7779

• Merge pull request aertslab#13 from kant/patch-1

  Show description for 67a18ac
  cflerin

  authored
  67a18ac

Commits on May 13, 2020

• Minor fix on line 72

  kant

  authored
  db4a0f0

Commits on Apr 17, 2020

• Merge pull request aertslab#10 from aertslab/fix_file_structure_sample_data

  Show description for 07cbb00
  cflerin

  authored
  07cbb00

• Fix file structure of sample_data* to follow Cell Ranger v2 output file structure and add gzip compression

  dweemx

  committed
  40bb210

Commits on Apr 3, 2020

• Merge pull request aertslab#9 from aertslab/dependabot/pip/bleach-3.1.4

  Show description for ddca5cb
  cflerin

  authored
  ddca5cb

Commits on Mar 31, 2020

• Bump bleach from 3.1.2 to 3.1.4

  Show description for 8b0eec4
  dependabot[bot]

  authored
  8b0eec4

Commits on Mar 26, 2020

• Merge pull request aertslab#8 from aertslab/dependabot/pip/bleach-3.1.2

  Show description for 4431b34
  cflerin

  authored
  4431b34

Commits on Mar 24, 2020

• Bump bleach from 3.1.1 to 3.1.2

  Show description for 771fb94
  dependabot[bot]

  authored
  771fb94

Commits on Mar 20, 2020

• Updates to PBMC10k downstream notebooks

  cflerin

  committed
  e680ad7

Commits on Mar 19, 2020

• Updated PBMC10k SCENIC notebook

  cflerin

  committed
  f3dcda7

Commits on Mar 13, 2020

• Merge pull request aertslab#7 from aertslab/dependabot/pip/psutil-5.6.6

  Show description for 8d6312d
  cflerin

  authored
  8d6312d

Commits on Mar 12, 2020

• Bump psutil from 5.6.3 to 5.6.6

  Show description for 724cfb3
  dependabot[bot]

  authored
  724cfb3

Commits on Feb 27, 2020

• Merge pull request aertslab#6 from aertslab/dependabot/pip/bleach-3.1.1

  Show description for 9df14d0
  cflerin

  authored
  9df14d0

Commits on Feb 24, 2020

• Bump bleach from 3.1.0 to 3.1.1

  Show description for 70fbd93
  dependabot[bot]

  authored
  70fbd93

Commits on Feb 14, 2020

• Print addiitonal diagnostic info when running

  Show description for 53ee9b4
  cflerin

  committed
  53ee9b4

• Updated readme (formatting)

  cflerin

  committed
  4f57e38

• Updated test config file paths

  cflerin

  committed
  5554e51

Commits on Feb 13, 2020

• Updated readme

  cflerin

  committed
  bca2c21

• Updated sample date and names

  Show description for 46b8c98
  cflerin

  committed
  46b8c98

Commits on Feb 12, 2020

• Merge pull request aertslab#5 from aertslab/dev

  Show description for 2f82a3a
  cflerin

  authored
  2f82a3a

• Updates to readme for tiny test profile

  cflerin

  committed
  fd18202

• Added a test profile for pipeline testing

  cflerin

  committed
  b492f9b

• Added new tiny sample data set

  cflerin

  committed
  56229aa

• Add option to pass a seed to the GRN step

  cflerin

  committed
  81b9d34

• Added alternate method to run GRN step

  Show description for 28702d5
  cflerin

  committed
  28702d5

• Cleanup 2: cleanup old code

  cflerin

  committed
  3149679

• Cleanup 1: updated requirements file, removed old Dockerfile

  cflerin

  committed
  aeeac00

• Updated container links, remove singularity no-home

  Show description for 088be89
  cflerin

  committed
  088be89

Commits on Jan 30, 2020

• Merge branch 'master' of github.com:aertslab/SCENICprotocol

  cflerin

  committed
  59b0a88

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