This github connects repos written in the area of statistical genetics and genomics. Mostly written in R. The most popular are:
- coloc to assess whether two traits share a common causal genetic variant
- annotSnpStats extends snpStats, an bioconductor package for genetic association analysis
- snpStatsWriter allows writing to disk of datasets stored in snpStats compressed format in R into various formats used by other genetic association softwares
- GUESSFM for Bayesian finemapping of causal variants from genetic association studies
- simGWAS for rapid simulation of GWAS case-control summary data
If you want to know more, please see https://chr1swallace.github.io.