begin to turn it into an anonymous repo

README.md

@@ -1,4 +1,6 @@
 markdown-cv
 ===========
 
-eliseopapa's curriculum vitae maintained in plain text and rendered to html and pdf using CSS
+A curriculum vitae maintained in plain text and rendered to html and pdf using CSS.
+
+For more details read [my blog post](http://eliseopapa.org/blog/2012/09/20/why-i-switched-to-markdown-for-my-cv/)

index.md

@@ -2,108 +2,45 @@
 layout: cv
 title: Eliseo Papa's CV
 ---
-# Eliseo Papa
-Biomedical Engineer, Computational Biologist, Data Scientist
+# Isaac Newton
+Physicist, mathematician, giant.
 
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-
-| <a href="http://eliseopapa.org">eliseopapa.org</a>
-| <a href="http://uk.linkedin.com/in/eliseopapa">LinkedIn</a>
+<a href="[email protected]">[email protected]</a>
+| <a href="http://en.wikipedia.org/wiki/Isaac_Newton">My wikipedia page/a>
 </div>
 
 
 ## Currently
 
-MBBS Candidate, Graduate Entry Medicine, Imperial College London  
-Researcher, [Alm lab](http://almlab.mit.edu), MIT
+subject to my first law
 
 ### Specialized in
 
-Medical Engineering, Analysis of large data sets, Microbiome, Machine learning, Immunology, Optics, Nano/microfabrication, Phylogenetics.
+Laws of motion, gravitation, minting coins, disliking [Robert Hooke](http://en.wikipedia.org/wiki/Robert_Hooke)
 
-### Research interests
-
-Host-pathogen interactions at the level of microbiome and single cells. Human Microbiome Project. High-throughput diagnostics. Electronic health records. Emerging properties of networks in a biological and social context. Self-organized systems.
 
-## Languages
+### Research interests
 
-Italian: Mother tongue  
-English: Perfect oral & written fluency  
-French:  Working knowledge  
+Cooling, power series, optics, alchemy, planetary motions, apples.
 
 
 ## Education
 
-`2009-now`
-__Imperial College London__
-
-- MBBS Graduate Entry Medicine Programme
-
-
-`2006-2012`
-__Harvard Medical School & Massachusets Institute of Technology__
-
-- PhD, Biomedical Engineering,
-   [Harvard/MIT Health Science & Technology Institute](http://hst.mit.edu)  
-- Thesis: [High-throughput experimental and computational tools for exploring immunity and the microbiome](https://speakerdeck.com/u/elipapa/p/phd-defense-talk-1)  
-- Representative courses:  
-    - _Harvard Medical School_ - pathology, renal pathophysiology, respiratory pathophysiology, cardiac pathophysiology.  
-    - _MIT_ - biomechanics, statistical learning, systems microbiology, forces fields and flows in biological systems, fluid mechanics, heat transfer, numerical modeling.
-
-
-`2006-2008`
-__Massachusets Institute of Technology__
-
-- SM in Mechanical Engineering
+`1654-1660`
+__The King's School, Grantham.__
 
+`June 1661 - now`
+__Trinity College, Cambridge__
 
-`2001-2005`
-__University of Toronto__
+- Sizar
 
-- BASc (Honors)
-- Engineering Science, Biomedical Option
+`1667 - 
+__Trinity College, Cambridge__
 
+- Fellow
+Option
 
-## Fellowships
-
-`2010-2011`
-NSERC Postgraduate D Scholarship, National Science Engineering Research Council, Canada
-
-`2008-2009`
-Poitras pre-doctoral fellowship 
-
-`2007`
-Martino Scholar, Harvard/MIT Health Science Tech. Inst.
-
-`2005-2008`
-NSERC Postgraduate M Scholarship, National Science Engineering Research Council, Canada
-
-`2005` 
-OGS Postgraduate Scholarship (declined), Ontario Government, Canada
-
-`2004` 
-NSERC Summer Research Award, National Science Engineering Research Council, Canada
-
-`2003` 
-\#2 Canadian Army University Course Undergrad Scholarship,University of Toronto
 
 ## Awards
 
@@ -139,71 +76,6 @@ Ontario Scholar, Government of Ontario, Canada
 [Non-invasive mapping of the gastrointestinal microbiota identifies children with inflammatory bowel disease.](http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0039242) 
 **PLoS ONE** 2012;7(6):e39242.
 
-`2011`
-Rhiannon White, Sachiko Miyata, *Eliseo Papa*, Eric Spooner, Kleoniki Gounaris, Murray Selkirk, Katerina Artavanis-Tsakonas.  
-Characterisation of the Trichinella spiralis deubiquitinating enzyme, TsUCH37, an evolutionarily conserved proteasome interaction partner. 
-**PLoS Negl Trop Dis.** 2011 Oct;5(10):e1340.
-
-`2011`
-Katerina Artavanis-Tsakonas, Pia V Kasperkovitz, *Eliseo Papa*, Michael L Cardenas, Nida S Khan, Annemarthe G Van der Veen, Hidde L Ploegh and Jatin M Vyas.  
-The Tetraspanin CD82 is Specifically Recruited to Fungal and Bacterial Phagosomes Prior to Acidification. 
-**Infection and Immunity** 2011 79(3):1098-106\
-
-`2009`
-Adebola Ogunniyi, Craig Story, *Eliseo Papa*, Eduardo Guillen, J. Christopher Love.  
-Screening Individual Hybridomas by Microengraving to Discover Monoclonal Antibodies.
-**Nature Protocols** 2009 4(5):767-82
-
-`2009`
-Jehnna L. Ronan, Craig Story, *Eliseo Papa*, J. Christopher Love.
-Optimization of the surfaces used to capture antibodies from single hybridomas reduces the time required for microengraving. 
-**Journal of Immunological Methods** 2009, 340(2):164-9\
-
-`2008`
-Craig Story\*, *Eliseo Papa\* (co-author)*, Chih-Chi Andrew Hu, Jehnna L Ronan, Hidde L Ploegh, J.Christopher Love.  
-Profiling Antibody Responses by Multiparametric Analysis of Single B Cells. 
-**PNAS** 2008 105(46):17902-7
-
-`2005`
-Hans Fischer, *Eli Papa*, Lichuan Liu, K. Sandy Pang, Warren C. W. Chan.  
-Preliminary Results: Exploring the Interactions of Quantum Dots with Whole Blood Components. 
-**SPIE Proceedings** 2005 5969,54
-
-`2004`
-Wen Jiang, *Eli Papa*, Hans Fischer, Sawitri Mardyani, Warren C.W. Chan. 
-Semiconductor quantum dots as contrast agents for whole animal imaging. 
-**Trends in Biotechnology** 2004 22:12
-
-
-### Posters
-
-`2012`
-White RR, Morrow M, Miyata S, Papa E, Spooner E, Selkirk M, Gounaris K, Das C, Artavanis-Tsakonas K  
-Characterisation of the Trichinella Spiralis Deubiquitinating Enzyme, TsUCH37  
-*Molecular and Cellular Biology of Helminth Parasites VII*
-
-`2012`
-Eliseo Papa, Michael Docktor, Christopher Smillie, Sarah Weber, Sarah P. Preheim, Dirk Gevers, Georgia Giannoukos, Dawn Ciulla, Diana Tabbaa, Jay Ingram, David B Schauer, Doyle V Ward, Joshua R Korzenik, Ramnik J Xavier, Athos Bousvaros, Eric J Alm.  
-[Diagnosing IBD from the fecal microbiome](http://eliseopapa.org/downloads/documents/ibdML-poster.pdf)  
-*Exploring Human Host-Microbiome Interactions in Health and Disease, Wellcome Trust Scientific Conferences*
-
-`2008`
-High-Throughput and High-Content Screening of Antibody Responses from Single Cells  
-*AIChE annual meeting, Nanoscale Science Engineering Forum*
-
-`2008`
-Applying Ligands to B Cell Receptors by Microfluidics  
-*AIChE annual meeting, Engineering Fundamentals in Life Sciences*
-
-`2008`
-Microengraving for high-throughput affinity mapping of humoral responses  
-*Harvard/MIT HST Forum*
-
-`2008`
-Multi-variate profiling of B cell immune responses  
-*Novartis Vaccine Symposium*
-
-
 ### Patents
 
 `2009`
@@ -220,59 +92,6 @@ __Alm Laboratory for Microbiology, Prof. Eric J. Alm__, MIT
 - Microbial evolution, phylogenetics
 
 
-`2006-2009`
-__Laboratory of Hidde L. Ploegh__, Whitehead Institute, MIT
-
-- Affinity and isotype mapping of antibody secretion in individual primary B cells.
-- Development of computational and statistical tools to monitor and predict evolution of immune responses
-- Murine antibody cloning and expression; fluorescence tagging
-- Real time fluorescence microcopy; advanced image analysis
-
-
-`2004-2005`
-__Biomedical Nanotechnology Group, Prof. W C. Chan__, University of Toronto
-
-- Nanoparticles cytotoxicity
-- Quantum Dots synthesis and characterization (TEM, Absorption, PL, X-IRD)
-- Real time fluorescence microscopy, single molecule spectroscopy and biophysics.
-
-
-`2003`
-__Biomaterials Group, Prof. M.C.Tanzi__, Politecnico di Milano, Italy
-
-- Synthesis of biocompatible polymeric scaffolds for tissue engineering applications.
-- Morphological, mechanical and functional characterization of polyurethane scaffolds.
-
-
-## Other employment
-
-`2006`
-__ESL Teacher, Inlingua Language School,__ Brescia, Italy
-
-- Teaching approx. 12hrs/week on individual basis and to large groups
-- Provided on site focussed training for companies
-
-
-`2004-2005`
-__Residence Don, St.Michael’s College Residence,__ University of Toronto, Canada
-
-- Mediate conflicts and provide academic or personal consulting.
-- Trained in cultural competence and conflict resolution
-- Responsible to enforce rules and to foster an accepting community
-
-
-`2000-2002`
-__IT Consultant System Admin, Ital Engineering s.a.s.,__ Brescia, Italy
-
-- Interviewed the customer and performed an organizational analysis
-- Regularly performed formal presentations to the management
-
-
-`2000`
-__Graphic Designer, Photo Image Studio,__ Brescia, Italy
-
-- Assisted photographers in the preparation of gallery exhibitions and openings
-
 
 ## Extracurricular
 
@@ -285,56 +104,8 @@ __Collegiate Cycling. [MIT Cycling Team](http://cycling.mit.edu/www/home)__
 - Eastern Collegiate Cycling Conference Road Champions
 - Cyclocross, US National Champions
 
-
-`2006`
-__Competitive Triathlon. Team Atletica Desenzano__
-
-- 9th cat. at ITU Bardolino’s International Triathlon
-
-
-`2003-2004`
-__Competitive Sailing. Italian sailing federation (FIV).__
-
-- 12th at European IMS Sailing Championship
-- 6th at Canadian J105 Championship
-
-
-`2004`
-__Engineers Without Borders.__
-
-- University of Toronto Conference delegate
-
-
-`2002`
-__University of Toronto Varsity Waterpolo.__
-
-- OUA Conference Champions
-
-
-`1998-2001`
-__Nuoto Club Brescia Swimming Club__
-
-- Regional level competitions
-
-
-
-## Volunteering
-
-`2005`
-__Field Operative, AISPO, San Raffaele del Monte Tabor Foundation.__ Milan, Italy
-
-- Streamlined diagnostic routines, Kampala’s Hospital & Gulu’s outpost, Uganda
-- Consulted regarding the infrastructure, human resources and logistics of the Kampala’s hospital
-
-
-## Interests
-Jazz music. International relations. Semiotics and
-its implications on mass psychology. Buddhism, Zen and oriental
-philosophies. Reading classics of Italian and English literature.
-Travelled by kayak along the major European rivers. Rock Climbing.
-
 <!-- ### Footer
 
-Last updated: October 2012 -->
+Last updated: May 2013 -->