changed default fpr threshold in search_motifs fn

colomemaria · Feb 7, 2024 · 6d10d65 · 6d10d65
1 parent ba44b0a
commit 6d10d65
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/episcanpy/tools/_motif_search.py b/episcanpy/tools/_motif_search.py
@@ -92,7 +92,7 @@ def background_distribution(adata):
 
 
 
-def search_motifs(adata, tf_names, release="JASPAR2022", pseudocounts=1, threshold_fpr=1e-6, n_jobs=1):
+def search_motifs(adata, tf_names, release="JASPAR2022", pseudocounts=1, threshold_fpr=1e-5, n_jobs=1):
 
     # fetch motif data
     motifs = fetch_motifs(tf_names=tf_names, release=release)