Connectome Mapping TooKit LIBrary (CMTKLIB) Data Resources

Overview

Datalad dataset that provides all data resources of the cmtklib module of Connectome Mapper 3 (https://github.com/connectomicslab/connectomemapper3).

• colortable_and_gcs stores all data resources (gcs atlas files and colortable) for Lausanne 2008 parcellation

• diffusion stores gradient tables and ODF direction files used by CMP2

• parcellation contains all GRAPHML and Freesurfer Color LUT for Native Freesurfer, Lausanne 2008 and Lausanne 2018 parcellations, with additional annot files for Lausanne 2018

• segmentation provides templates for brain extraction (ANTS template IXI and ANTS MICCAI2012 multi-atlas challenge) and for thalamic nuclei segmentation

Git-annexed data are hosted @ https://osf.io/5hy42/.

Funding

Work supported by the Sinergia SNFNS-170873 Grant.

Citing

CMTKLIB-data is published to Zenodo. If you use CMTKLIB-data in your work, please acknowledge it with the following citation:

Tourbier, S., Aleman-Gomez, Y., Mullier, Emeline, Griffa, A., Bach Cuadra, M., & Hagmann, P.. (2021). connectomicslab/CMTKLIB-data: CMTKLIB-data v1.X (Version v1.X) [Data set]. Zenodo. http://doi.org/10.5281/zenodo.4593025

License

This dataset is licensed under CC BY 4.0. See license for more details.

All trademarks referenced herein are property of their respective holders.

Copyright (C) 2009-2021, Hospital Center and University of Lausanne (UNIL-CHUV), Ecole Polytechnique Fédérale de Lausanne (EPFL), Switzerland & Contributors.