cthoyt
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obo-community-health Public
🫀 Check the OBO Foundry repositories to see what's going on
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cthoyt.github.io Public
My personal website, served at https://cthoyt.com
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w3id.org Public
Forked from perma-id/w3id.orgWebsite source code for w3id.org.
HTML UpdatedJan 17, 2025 -
dermatology Public
Forked from dermatology-ontology/dermatologyDermatological Disease Ontology
Web Ontology Language UpdatedJan 16, 2025 -
fovt Public
Forked from futres/fovtfutres-specific ontology of vertebrate traits
Makefile Creative Commons Zero v1.0 Universal UpdatedJan 16, 2025 -
pystow Public
👜 Easily pick a place to store data for your Python code.
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cookiecutter-snekpack Public
🍪 A cookiecutter package for an enlightened python package
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uv Public
Forked from astral-sh/uvAn extremely fast Python package and project manager, written in Rust.
Rust Apache License 2.0 UpdatedJan 13, 2025 -
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docdata Public
Add structured information to the end of your python docstrings
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drugbank-downloader Public
Don't worry about DrugBank licensing - write code that knows how to download it automatically
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semantic-pydantic Public
Annotate data models in Pydantic and APIs in FastAPI with the Bioregistry to make them more FAIR
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snekpack-demo Public
Demonstrates using the cookecutter-snekpack template.
Python MIT License UpdatedJan 13, 2025 -
pato Public
Forked from pato-ontology/patoPATO - the Phenotype And Trait Ontology
Makefile BSD 3-Clause "New" or "Revised" License UpdatedJan 8, 2025 -
cdno Public
Forked from CompositionalDietaryNutritionOntology/cdnoCompositional Dietary Nutrition Ontology
Makefile Creative Commons Zero v1.0 Universal UpdatedJan 8, 2025 -
semantic-mapping-vocabulary Public
Forked from mapping-commons/semantic-mapping-vocabularyhttps://mapping-commons.github.io/semantic-mapping-vocabulary/
Makefile UpdatedJan 6, 2025 -
ro-summary Public
Scripts for generating summaries of the Relation Ontology
Python MIT License UpdatedJan 1, 2025 -
contributor-role-ontology Public
Forked from data2health/contributor-role-ontologyThis ontology provides contribution roles for use in crediting persons or organizations.
Makefile UpdatedDec 3, 2024 -
cell-ontology Public
Forked from obophenotype/cell-ontologyAn ontology of cell types
Makefile Creative Commons Attribution 4.0 International UpdatedDec 3, 2024 -
taxrank Public
Forked from phenoscape/taxrankTaxonomic rank ontology
Makefile Creative Commons Zero v1.0 Universal UpdatedDec 3, 2024 -
zebrafish-anatomical-ontology Public
Forked from ZFIN/zebrafish-anatomical-ontologyOntology describing the anatomy of Danio rerio from a single cell to adult fish. The namespace of the ontology is zebrafish_anatomical_ontology the prefix is ZFA. Updates to ZFA are released every …
Makefile Other UpdatedDec 3, 2024 -
zenodo-client Public
A tool for automated uploading and version management of scientific data to Zenodo
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BERN2 Public
Forked from dmis-lab/BERN2BERN2: an advanced neural biomedical namedentity recognition and normalization tool
Python BSD 2-Clause "Simplified" License UpdatedNov 30, 2024 -
ncbitaxon Public
Forked from obophenotype/ncbitaxonBuild for NCBITaxon
Python BSD 3-Clause "New" or "Revised" License UpdatedNov 27, 2024 -
virtualfish Public
Forked from justinmayer/virtualfishFish shell tool for managing Python virtual environments
Shell MIT License UpdatedNov 27, 2024 -
mypy Public
Forked from python/mypyOptional static typing for Python
Python Other UpdatedNov 14, 2024 -
sibo Public
Forked from obophenotype/siboSocial Insect Behavior Ontology
Web Ontology Language UpdatedNov 13, 2024 -
efo Public
Forked from EBISPOT/efoGithub repo for the Experimental Factor Ontology (EFO)
Makefile UpdatedNov 10, 2024