Commits

Branch selector

 develop

User selector

mdsmith

Datepicker

All time

Commit History

Commits on Apr 16, 2019

• Merge pull request #146 in SAT/pbcore from bugfix/BEN-325-remove-duplicate-pbi-on-consolidate to develop

  Show description for 8a61b22
  mdsmith

  committed
  8a61b22

  Copy full SHA for 8a61b22

• Fix duplicate pbi on consolidate

  Show description for 31ac8d6
  mdsmith

  committed
  31ac8d6

  Copy full SHA for 31ac8d6

Commits on Apr 2, 2019

• Merge pull request #143 in SAT/pbcore from bugfix/SEQ-5339-dataset-qname-filter-producing-inconsistent-results to develop

  Show description for 3da9453
  mdsmith

  committed
  3da9453

  Copy full SHA for 3da9453

Commits on Apr 1, 2019

• Fix qname 'in' and 'not in' bug

  mdsmith

  committed
  14c190f

  Copy full SHA for 14c190f

Commits on Sep 26, 2018

• Merge pull request PacificBiosciences#110 in SAT/pbcore from feature/SE-2004-pbcore-s-datasets-should-write-to to develop

  Show description for 394e6bc
  mdsmith

  committed
  394e6bc

  Copy full SHA for 394e6bc

• Fix issue with unicode filenames

  mdsmith

  committed
  21381b8

  Copy full SHA for 21381b8

• Merge pull request PacificBiosciences#109 in SAT/pbcore from feature/SE-2004-pbcore-s-datasets-should-write-to to develop

  Show description for dc90e3a
  mdsmith

  committed
  dc90e3a

  Copy full SHA for dc90e3a

• Add write to open file

  Show description for c16cc0e
  mdsmith

  committed
  c16cc0e

  Copy full SHA for c16cc0e

Commits on Sep 25, 2018

• Merge pull request PacificBiosciences#108 in SAT/pbcore from bugfix/SE-1779-dataset-filter-with-file-of-qnames to develop

  Show description for 29d2dd4
  mdsmith

  committed
  29d2dd4

  Copy full SHA for 29d2dd4

• Add qname_file filter key

  Show description for b8faa42
  mdsmith

  committed
  b8faa42

  Copy full SHA for b8faa42

Commits on Sep 14, 2018

• Merge pull request PacificBiosciences#106 in SAT/pbcore from feature/SPI-2657-support-empty-reads to develop

  Show description for c3412eb
  mdsmith

  committed
  c3412eb

  Copy full SHA for c3412eb

• Add support for records of length 0

  mdsmith

  committed
  1384a3a

  Copy full SHA for 1384a3a

Commits on Aug 21, 2018

• Merge pull request PacificBiosciences#103 in SAT/pbcore from bugfix/SPI-2518-get-fresh-1c4a-data to develop

  Show description for a9c4741
  mdsmith

  committed
  a9c4741

  Copy full SHA for a9c4741

• Add error message when mixed pbi columns are attempted

  mdsmith

  committed
  321bc41

  Copy full SHA for 321bc41

Commits on Jun 28, 2018

• Update XSDs

  mdsmith

  committed
  40c1528

  Copy full SHA for 40c1528

Commits on Jun 22, 2018

• Add modulo/hash downsampling filter support

  mdsmith

  committed
  d188fd3

  Copy full SHA for d188fd3

Commits on May 21, 2018

• Merge pull request PacificBiosciences#84 in SAT/pbcore from feature/SPI-1906-add-adapters-finding to develop

  Show description for 1a9ea07
  mdsmith

  committed
  1a9ea07

  Copy full SHA for 1a9ea07

• Add adapter-file detection to SubreadSet creation

  mdsmith

  committed
  7be1ad6

  Copy full SHA for 7be1ad6

Commits on May 18, 2018

• Merge pull request PacificBiosciences#83 in SAT/pbcore from feature/SPI-1906-add-adapter-member to develop

  Show description for 836b679
  mdsmith

  committed
  836b679

  Copy full SHA for 836b679

• Add adapters member to externalResources

  mdsmith

  committed
  84dbd1a

  Copy full SHA for 84dbd1a

Commits on Apr 2, 2018

• Merge pull request PacificBiosciences#77 in SAT/pbcore from feature/SE-1460-remove-pbcore-per-contig-metadata to develop

  Show description for 433ed5d
  mdsmith

  committed
  433ed5d

  Copy full SHA for 433ed5d

• Fix a ContigSet merge bug, add test

  mdsmith

  committed
  b84de89

  Copy full SHA for b84de89

• Merge pull request PacificBiosciences#76 in SAT/pbcore from feature/SE-1460-remove-pbcore-per-contig-metadata to develop

  Show description for 97924de
  mdsmith

  committed
  97924de

  Copy full SHA for 97924de

Commits on Mar 31, 2018

• Update XSDs

  mdsmith

  committed
  bce446d

  Copy full SHA for bce446d

Commits on Mar 30, 2018

• Remove Contigs from ContigSet metadata

  mdsmith

  committed
  08379cb

  Copy full SHA for 08379cb

Commits on Oct 24, 2017

• Merge pull request PacificBiosciences#52 in SAT/pbcore from bugfix/SL-2129-runqc-control-report-missing-concordance to develop

  Show description for efb76d0
  mdsmith

  committed
  efb76d0

  Copy full SHA for efb76d0

• Add SampleMode accessor

  mdsmith

  committed
  467abc1

  Copy full SHA for 467abc1

Commits on Sep 28, 2017

• Merge pull request PacificBiosciences#45 in SAT/pbcore from feature/SL-1973-update-pbcore-from-new-xsd to develop

  Show description for e44990b
  mdsmith

  committed
  e44990b

  Copy full SHA for e44990b

• Make sure ns prefixes aren't used for member instances

  mdsmith

  committed
  03f0655

  Copy full SHA for 03f0655

• Tune up namespacing

  mdsmith

  committed
  4c77c9d

  Copy full SHA for 4c77c9d

Commits on Sep 20, 2017

• Merge pull request PacificBiosciences#41 in SAT/pbcore from feature/SL-1934-update-pbcore-for-new-xsds to develop

  Show description for dd15bf2
  mdsmith

  committed
  dd15bf2

  Copy full SHA for dd15bf2

• Remove eroneous BioSamples addition

  Show description for bfcd3a8
  mdsmith

  committed
  bfcd3a8

  Copy full SHA for bfcd3a8

• Merge pull request PacificBiosciences#39 in SAT/pbcore from feature/SL-1934-update-pbcore-for-new-xsds to develop

  Show description for b63cf3a
  mdsmith

  committed
  b63cf3a

  Copy full SHA for b63cf3a

Commits on Sep 19, 2017

• Update XSD, Add BioSample convenience

  Show description for 3b09117
  mdsmith

  committed
  3b09117

  Copy full SHA for 3b09117

Commits on Jul 20, 2017

• Merge pull request PacificBiosciences#37 in SAT/pbcore from feature/SE-848-add-filename-support-to-pbcore-set to develop

  Show description for f20f739
  mdsmith

  committed
  f20f739

  Copy full SHA for f20f739

Pagination

Previous

Next