Dep updates (#262)

dan2097 · Jul 25, 2024 · 79a8aa2 · 79a8aa2
1 parent 91ae24f
commit 79a8aa2
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Showing 3 changed files with 11 additions and 10 deletions.
diff --git a/.github/workflows/maven.yml b/.github/workflows/maven.yml
@@ -7,11 +7,11 @@ on: [push, pull_request]
 
 jobs:
   build:
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-22.04
     strategy:
       matrix:
         # test against latest update of each major Java version:
-        java: [ 8, 11, 17 ]
+        java: [ 8, 11, 17, 21 ]
     name: Java ${{ matrix.java }}
     steps:
       - uses: actions/checkout@v3

diff --git a/README.md b/README.md
@@ -115,6 +115,7 @@ The workings of OPSIN are more fully described in:
     Chemical Name to Structure: OPSIN, an Open Source Solution
     Daniel M. Lowe, Peter T. Corbett, Peter Murray-Rust, Robert C. Glen
     Journal of Chemical Information and Modeling 2011 51 (3), 739-753
+    https://doi.org/10.1021/ci100384d
 
 If you use OPSIN in your work, then it would be great if you could cite us.
 

diff --git a/pom.xml b/pom.xml
@@ -124,7 +124,7 @@
           <dependency>
             <groupId>org.codehaus.mojo</groupId>
             <artifactId>extra-enforcer-rules</artifactId>
-            <version>1.6.2</version>
+            <version>1.8.0</version>
           </dependency>
         </dependencies>
       </plugin>
@@ -214,37 +214,37 @@
       <dependency>
         <groupId>com.fasterxml.woodstox</groupId>
         <artifactId>woodstox-core</artifactId>
-        <version>6.5.1</version>
+        <version>6.7.0</version>
       </dependency>
       <dependency>
         <groupId>org.apache.logging.log4j</groupId>
         <artifactId>log4j-api</artifactId>
-        <version>2.20.0</version>
+        <version>2.23.1</version>
       </dependency>
       <dependency>
         <groupId>org.apache.logging.log4j</groupId>
         <artifactId>log4j-core</artifactId>
-        <version>2.20.0</version>
+        <version>2.23.1</version>
       </dependency>
       <dependency>
         <groupId>io.github.dan2097</groupId>
         <artifactId>jna-inchi-core</artifactId>
-        <version>1.2</version>
+        <version>1.2.1</version>
       </dependency>
       <dependency>
         <groupId>commons-io</groupId>
         <artifactId>commons-io</artifactId>
-        <version>2.12.0</version>
+        <version>2.16.1</version>
       </dependency>
       <dependency>
         <groupId>commons-cli</groupId>
         <artifactId>commons-cli</artifactId>
-        <version>1.5.0</version>
+        <version>1.8.0</version>
       </dependency>
       <dependency>
         <groupId>org.junit.jupiter</groupId>
         <artifactId>junit-jupiter</artifactId>
-        <version>5.9.2</version>
+        <version>5.10.3</version>
         <scope>test</scope>
       </dependency>
       <dependency>