dantaki
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a python extension of CNVnator -- a tool for CNV analysis from depth-of-coverage by mapped reads
A quality control analysis tool for high throughput sequencing data
CLI for converting CSV/TSV files to Excel spreadsheets without mangling gene names
tools for adding mutations to existing .bam files, used for testing mutation callers
DeepMosaic is a deep-learning-based mosaic single nucleotide classification tool without the need of matched control information.
Skeleton: A Dead Simple, Responsive Boilerplate for Mobile-Friendly Development
A HTML/CSS Template for Building Projects or Personal Websites
This repository collects pipelines, codes, and some intermediate results for adult brain somatic mosaicism study.
Repository for training events focussed on the Triton Shared Computing Cluster (TSCC)
SDSC Bootcamps are training sessions that include different types of training materials, including lectures, webinars, tutorials, and hands-on coding/practice sessions that provide the attendee wit…
Chromatin State Maps in Mouse
Keras Implementation of Neural Style Transfer from the paper "A Neural Algorithm of Artistic Style" (http://arxiv.org/abs/1508.06576) in Keras 2.0+
Python library to handle Gene Ontology (GO) terms
Novel Coronavirus (COVID-19) Cases, provided by JHU CSSE
Telomerecat: The telomere computational analysis tool
The Django source code for the GovTrack.us website.
Example R scripts to run burden and association analysis on array CNV data
An R package implementing an imperative data manipulation and regression framework (Stata-like)
GitHub do not ban us from open source world 🇮🇷
GTEx & TOPMed data production and analysis pipelines
An integrated retroduplication caller based on 1) exon-exon junction and 2) discordant reads