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Achievement: StarstruckAchievement: YOLOAchievement: Pull Shark

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@KrishnaswamyLab

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  • dbhaskar92.github.io Public

    Personal academic website

    HTML MIT License Updated Oct 31, 2024

  • LaTeX Public

    Selected LaTeX documents to serve as templates for future reference

    TeX Updated Oct 29, 2024

  • MIOFlow Public

    Forked from KrishnaswamyLab/MIOFlow

    Trajectory inference for single-cell sequencing data

    Jupyter Notebook Apache License 2.0 Updated Oct 1, 2024

  • GEFMAP Public

    Forked from KrishnaswamyLab/GEFMAP

    GEFMAP leverages the graph structure of metabolic networks to learn the metabolic objective of cells and estimate relative flux rates of reactions

    Jupyter Notebook Updated Aug 23, 2024

  • SAUCIE Public

    Forked from KrishnaswamyLab/SAUCIE

    SAUCIE (Sparse Autoencoder for Unsupervised Clustering, Imputation, and Embedding) is a deep neural network to process and extract structure from scRNA-seq and CyTOF data, addressing challenges lik…

    Python MIT License Updated Aug 22, 2024

  • AAnet Public

    Forked from KrishnaswamyLab/AAnet

    Archetypal Analysis network (AAnet)

    Jupyter Notebook Updated Aug 21, 2024

  • MAGIC Public

    Forked from KrishnaswamyLab/MAGIC

    MAGIC (Markov Affinity-based Graph Imputation of Cells), is a method for imputing missing values restoring structure of large biological datasets.

    Jupyter Notebook GNU General Public License v2.0 Updated Aug 21, 2024

  • PHATE Public

    Forked from KrishnaswamyLab/PHATE

    PHATE (Potential of Heat-diffusion for Affinity-based Transition Embedding) is a tool for visualizing high dimensional data.

    Python GNU General Public License v2.0 Updated Aug 21, 2024

  • fMRI-Reconstruction Public

    Reconstruct fMRI from MEG and vice-versa

    Jupyter Notebook Updated Jan 4, 2024

  • Zebrafish-Pigmentation-TDA Public

    Topological data analysis of Zebrafish skin pigmentation patterns

    Jupyter Notebook Updated Oct 3, 2022

  • Coculture-ABM-Model Public

    Jupyter Notebook 2 Updated Oct 3, 2022

  • awesome-tda Public

    Forked from FatemehTarashi/awesome-tda

    A curated list of topological data analysis (TDA) resources and links.

    Creative Commons Zero v1.0 Universal Updated Aug 20, 2022

  • ENGN2560_DL_Lab Public

    Forked from HongyiFan/ENGN2560_DL_Lab
    Python Updated Aug 20, 2022

  • challenge-iclr-2022 Public

    Forked from geomstats/challenge-iclr-2022

    GitHub repository for the ICLR Computational Geometry & Topology Challenge 2021

    Jupyter Notebook Updated Jun 4, 2022

  • server-utils Public

    Server setup and administration

    Shell Updated Apr 18, 2022

  • dbhaskar92 Public

    Updated Mar 14, 2022

  • BrownU-BioMed Public

    Agent-based models, image segmentation and TDA for doctoral research at BrownU

    Jupyter Notebook 1 Updated Feb 8, 2021

  • AMS-MRC-2018 Public

    AMS Agent-Based Modeling Workshop

    Jupyter Notebook Updated Feb 20, 2020

  • SummerWork2018 Public

    Summer Workshop (GNU/Linux, version control, Python, R, distributed computing)

    Jupyter Notebook Updated Jul 13, 2018

  • Research-Scripts Public

    Modelling (CompuCell3D, CHASTE & CellProfiler) and image analysis for M.Sc. thesis at UBC

    Python 3 5 Updated Mar 26, 2018

  • RhoGTPase-Paper Public

    Forked from mhzhang/RhoGTPase-Paper
    C++ Updated Aug 4, 2017

  • Metaheuristic-Algorithms Public

    Implementation of metaheuristic algorithms and empirical analysis

    MATLAB 1 1 Updated May 21, 2016

  • MPSO-ParamILS Public

    Using ParamILS to configure memetic particle swarm optimization algorithm

    Ruby Updated May 6, 2016

  • ipsearch Public

    Search for hostnames and IP addresses in large log files

    Perl Updated Apr 1, 2016

  • Slick-Game-Framework Public

    Framework for creating LWJGL games using Box2D Physics Engine

    Java Updated Mar 30, 2016