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Tags: dmeister/bwa

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0.7.3a

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Release bwa-0.7.3a-r367

In 0.7.3, the wrong CIGAR bug was only fixed in one scenario, but not fixed
in another corner case.

0.7.3

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Release BWA-0.7.3-r366

0.7.2

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Release bwa-0.7.2-r351

For the TLEN sign fix. Sorry for the significant bug in 0.7.0/0.7.1

0.7.1

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Release 0.7.1-r347

0.7.0

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r313: release bwa-0.7.0

color-final

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Multiple changes:

1. Removed bwa.{h,c}. I am not going to finish them anyway.
2. Updated to the latest khash.h, which should be faster.
3. Define 64-bit vector and 128-bit integer/vector in utils.h.

bwapi-final

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code backup

narrow-band-final

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better treatment for micro-repeat

0.6.2

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r126: release bwa-0.6.2

0.6.1

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Release bwa-0.6.1