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Commits on Nov 30, 2024

• version bump v1.3.6

  katosh

  committed
  e7f0093

• deal with non-sparse distance matrix

  katosh

  committed
  9f4c5a9

• version bump v1.3.5

  katosh

  committed
  b307d29

• Merge branch 'master' of github.com:dpeerlab/Palantir

  katosh

  committed
  e8a03c7

• fix run_local_variability

  katosh

  committed
  d5d13be

Commits on Nov 26, 2024

• update tests for magic_imputation and keep sparsity in anndata

  katosh

  committed
  ede1ca2

• bump bersion to 1.3.5rc

  katosh

  committed
  1225414

• Merge branch 'master' into magic-sparsity

  katosh

  committed
  a2b7705

• turn sparsified matrix into sparse format

  katosh

  committed
  b0f949e

Commits on Nov 25, 2024

• add options for clipping small values to 0

  jordanc17

  committed
  898c8fa

Commits on Nov 20, 2024

• bump version v1.3.4

  katosh

  committed
  3fbcb77

Commits on Nov 19, 2024

• Fix #39 again

  katosh

  committed
  185780e

• bugfix: None colormap

  katosh

  committed
  d0adcf1

Commits on Nov 16, 2024

• update deprecated cmap retrival

  katosh

  committed
  41d5fa8

• bugfix if DM is already a DataFrame

  katosh

  committed
  81fa893

Commits on Sep 26, 2024

• forward scanpy kwars in plot_trajectory

  katosh

  committed
  856c18e

Commits on Jun 13, 2024

• clearer doc for cell finding utilities

  katosh

  committed
  5fe3b46

Commits on May 15, 2024

• do not plot nan cluster

  katosh

  committed
  30046bc

• branch selection robust against NaNs

  katosh

  committed
  03587b6

Commits on Apr 22, 2024

• document kwargs for some plotting functions

  katosh

  committed
  61dd6f7

• update plot_stats doc

  katosh

  committed
  a210f63

• avoid depreication

  katosh

  committed
  b99f4ca

• avoid devision by zero (#139)

  katosh

  committed
  12e363b

Commits on Apr 4, 2024

• make sphinx documentation

  katosh

  committed
  fe7f21d

• version bump to 1.3.3

  katosh

  committed
  629be90

• update to new scanpy api

  katosh

  committed
  4b87cfa

• update scanpy _color_vector usage

  katosh

  committed
  e1d810c

• better error message for highlight_cells_on_umap with string

  katosh

  committed
  0b3e33c

Commits on Jan 11, 2024

• numeric stability and progtess for run_local_variability

  katosh

  committed
  fb2aab9

Commits on Nov 28, 2023

• test io

  katosh

  committed
  daf25be

Commits on Nov 27, 2023

• scale pseudotime at compute

  katosh

  committed
  2f33c68

Commits on Nov 7, 2023

• implement plot_trajectory

  katosh

  committed
  4a04527

Commits on Oct 17, 2023

• bugfix: implement previous index, fixes #124

  katosh

  committed
  d6f93f4

• bu,p version to v1.3.2

  katosh

  committed
  f14ef88

Commits on Oct 16, 2023

• bugfix early cell fallback

  katosh

  committed
  f0211fa

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