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Commits on Dec 3, 2017

• Added improved cardinality estimator from Ertl (2017)

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Commits on Nov 19, 2017

• Add dump_taxdb to default progs, add -Wextra

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  94573d3

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• Fix sparse mode insert

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Commits on Nov 15, 2017

• Update version messages

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Commits on Nov 14, 2017

• Put static HLL_PRECISION outside of struct

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Commits on Nov 11, 2017

• Allow setting custom precision

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Commits on Nov 10, 2017

• Fix Makefile

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  1d37b54

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• Fixed HLL bug introduced by using vector for sparse representation

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Commits on Nov 9, 2017

• Fix taxonomy reporting order and percentage

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• Merge branch 'master' of https://github.com/fbreitwieser/kraken-hll

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• Fix licensing

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  c6871c1

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• Fix gzstream building and licensing

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  93c155f

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• Fix gzstream compilation, update on HLL

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Commits on Nov 8, 2017

• Merge branch 'master' of https://github.com/fbreitwieser/kraken-hll

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• Fix indent

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  30a6538

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• Merge branch 'master' of https://github.com/fbreitwieser/kraken-hll

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• Compute k-mer counts if not present

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Commits on Nov 7, 2017

• Change name to KrakenHLL

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Commits on Nov 6, 2017

• Change name to KrakenHLL

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Commits on Nov 5, 2017

• Add environment CPPFLAGS and LDFLAGS

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• Fox parent map generation in taxDB

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• Make sure TaxDB is not copied

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Commits on Oct 25, 2017

• Many small changes to make it working for GCC 4.4 / C++0x

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• Update

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Commits on Oct 23, 2017

• Update

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  7d1ab24

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Commits on Oct 18, 2017

• Merge branch 'master' of https://github.com/fbreitwieser/kraken-hll

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• Test modification of lca

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• Don't use .at() for vector access

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• Add species subgroup and group ranks

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• Do not give separate taxids for human sequences (fixed now)

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  75b24ae

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• Update to classification grading

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• Allow to run build_taxdb with a taxdb as consistency check

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• Dump taxdb without ending separators (for kraken-report)

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Commits on Oct 2, 2017

• Fix bug in reading names and nodes

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• Merge branch 'master' of https://github.com/fbreitwieser/kraken-hll

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