Ran roxygenize

DESCRIPTION

@@ -1,12 +1,42 @@
 Package: pacman
 Type: Package
 Title: Package Management Tool
-Version: 0.1.0
+Version: 0.2.0
 Date: 2012-05-09
 Author: Tyler Rinker & Dason Kurkiewicz
 Maintainer: Tyler Rinker <[email protected]>
-Depends: R (>= 2.15.0)
-Suggests: XML
-Description: This package is a designed to more efficiently manage packages.  pacman  conveniently  wraps library and package related functions and names them in an intuitive and consistent fashion.  It seeks to combine functionality from lower level functions that can speed up workflow.
+Depends:
+    R (>= 2.15.0)
+Suggests:
+    XML
+Description: This package is a designed to more efficiently manage packages.
+    pacman conveniently wraps library and package related functions and names
+    them in an intuitive and consistent fashion.  It seeks to combine
+    functionality from lower level functions that can speed up workflow.
 License: GPL-2
 URL: http://trinkerrstuff.wordpress.com/
+Collate:
+    'p_author.R'
+    'p_base.R'
+    'p_citation.R'
+    'p_cran.R'
+    'p_data.R'
+    'p_delete.R'
+    'p_exists.R'
+    'p_functions.R'
+    'p_getXML.R'
+    'p_help.R'
+    'p_information.R'
+    'p_install.R'
+    'p_interactive.R'
+    'p_library.R'
+    'p_load.R'
+    'p_loaded.R'
+    'p_news.R'
+    'p_path.R'
+    'p_search_any.R'
+    'p_search_library.R'
+    'p_unload.R'
+    'p_update.R'
+    'p_version.R'
+    'p_vignette.R'

NAMESPACE

@@ -1,39 +1,36 @@
-
-export(p_author) 
-export(p_base) 
-export(p_citation)          
-export(p_cite) 
-export(p_cran)                          
-export(p_data)             
-export(p_delete)                    
-export(p_del) 
-export(p_exists) 
-export(p_functions)  
+export(p_author)
+export(p_base)
+export(p_citation)
+export(p_cite)
+export(p_cran)
+export(p_data)
+export(p_del)
+export(p_delete)
+export(p_exists)
+export(p_functions)
 export(p_funs)
-export(p_get)        
+export(p_get)
 export(p_getXML)
-export(p_help)              
-export(p_information)     
+export(p_help)
 export(p_info)
+export(p_information)
 export(p_install)
-export(p_interactive)      
 export(p_inter)
-export(p_library)         
-export(p_lib) 
-export(p_load)       
-export(p_loaded)          
-export(p_news)       
-export(p_path)       
-export(p_unload)              
-export(p_search_any) 
-export(p_sa) 
-export(p_search_library)          
-export(p_sl) 
-export(p_update)             
-export(p_version)         
+export(p_interactive)
+export(p_lib)
+export(p_library)
+export(p_load)
+export(p_loaded)
+export(p_news)
+export(p_path)
+export(p_sa)
+export(p_search_any)
+export(p_search_library)
+export(p_sl)
+export(p_unload)
+export(p_up)
+export(p_update)
 export(p_ver)
-export(p_vignette) 
-export(p_vign) 
-
-
-
+export(p_version)
+export(p_vign)
+export(p_vignette)

R/p_base.R

@@ -27,4 +27,4 @@ function(open = FALSE){
     }
     cat('\npackages with an "*" are loaded when R starts\n\n')
     return(z)
-}
+}

R/p_citation.R

@@ -21,4 +21,5 @@ function(package="r") {
     }
 }
 
-p_cite <- p_citation
+#' @export
+p_cite <- p_citation

R/p_delete.R

@@ -53,4 +53,5 @@ function (...)
     }
 }
 
-p_del <- p_delete
+#' @export
+p_del <- p_delete

R/p_exists.R

@@ -23,4 +23,4 @@ function (package, cran = TRUE)
     } else {
         x %in% list.files(.libPaths())
     }
-}
+}

R/p_functions.R

@@ -37,4 +37,5 @@ function (package = NULL, load = FALSE)
     return(a)
 }
 
-p_funs <- p_functions
+#' @export
+p_funs <- p_functions

R/p_getXML.R

@@ -28,4 +28,4 @@ function(package="XML", fun){
     }else{
         cat("Please download the XML package before using", fun, "\n")    
     }
-}
+}

R/p_help.R

@@ -76,4 +76,4 @@ function (package = NULL, web = FALSE, pdf = FALSE)
             }
         }
     }
-}
+}

R/p_information.R

@@ -21,4 +21,5 @@ function(package=NULL) {
     packageDescription(x)
 }
 
-p_info <- p_information
+#' @export
+p_info <- p_information

R/p_install.R

@@ -16,4 +16,5 @@ function(package){
     do.call('library', list(pack))
 }
 
-p_get <- p_install
+#' @export
+p_get <- p_install

R/p_interactive.R

@@ -33,4 +33,5 @@ function() {
     cat("Thank you for using the p_interactive function!\n\n")
 }
 
-p_inter <- p_interactive
+#' @export
+p_inter <- p_interactive

R/p_library.R

@@ -32,4 +32,5 @@ function (open = FALSE)
     return(y)
 }
 
-p_lib <- p_library
+#' @export
+p_lib <- p_library

R/p_path.R

@@ -2,9 +2,9 @@
 #' 
 #' See path to library of add on package
 #' 
-#' @alias p_path
+#' @aliases p_path
 #' @seealso \code{\link[base]{.libPaths}}
-#' @keyword package library location path
+#' @keywords package library location path
 #' @export
 #' @examples
 #' p_path()

R/p_search_any.R

@@ -4,7 +4,7 @@
 #' Uses agrep to find packages by 
 #' maintainer (often this is the author as well) or by name
 #' 
-#' @alias p_search_any p_sa
+#' @aliases p_search_any p_sa
 #' @param term A search character string
 #' @param search.by The variable to search by (takes 
 #' a integer or a character string): 1-"Maintainer", 
@@ -53,4 +53,5 @@ function (term, search.by = "Maintainer")
     }
 }
 
-p_sa <- p_search_any
+#' @export
+p_sa <- p_search_any

R/p_search_library.R

@@ -44,4 +44,5 @@ function(begins.with = NULL, contains = NULL){
     cat(x, "loaded\n")
 }
 
-p_sl <- p_search_library
+#' @export
+p_sl <- p_search_library

R/p_unload.R

@@ -70,4 +70,4 @@ function (..., negate = FALSE)
         cat("The following packages have been unloaded:\n", paste0("\b", 
             paste(y, collapse = ", ")), "\n")
     }
-}
+}

R/p_update.R

@@ -38,4 +38,5 @@ function (install = TRUE) {
      }
 }
 
-p_up <- p_update
+#' @export
+p_up <- p_update

R/p_version.R

@@ -21,4 +21,5 @@ function(package="R") {
     }
 }
 
-p_ver <- p_version
+#' @export
+p_ver <- p_version

R/p_vignette.R

@@ -63,4 +63,5 @@ function(package = "all"){
                    " or a the name of a package that has a vignette"))
 }
 
-p_vign <- p_vignette
+#' @export
+p_vign <- p_vignette

man/p_author.Rd

@@ -1,29 +1,22 @@
 \name{p_author}
 \alias{p_author}
-%- Also NEED an '\alias' for EACH other topic documented here.
-\title{
-Returns the author of a package
-}
-\description{
-Returns the author of a package
-}
+\title{Returns the author of a package}
 \usage{
-p_author(package = "base")
+  p_author(package = "base")
 }
-%- maybe also 'usage' for other objects documented here.
 \arguments{
-  \item{package}{
-name of package
-}
+  \item{package}{name of package}
 }
-\seealso{
-\code{\link[utils]{packageDescription}}
+\description{
+  Returns the author of a package
 }
 \examples{
 p_author(pacman)
 p_author()
 }
-% Add one or more standard keywords, see file 'KEYWORDS' in the
-% R documentation directory.
+\seealso{
+  \code{\link[utils]{packageDescription}}
+}
 \keyword{author}
 \keyword{package}
+

man/p_base.Rd

@@ -1,33 +1,27 @@
 \name{p_base}
 \alias{p_base}
-%- Also NEED an '\alias' for EACH other topic documented here.
-\title{
-List all the packages in a base install
-}
-\description{
-List all the packages in a base install
-}
+\title{List all the packages in a base install}
 \usage{
-p_base(open=FALSE)
-%- maybe also 'usage' for other objects documented here.
+  p_base(open = FALSE)
 }
 \arguments{
-  \item{open}{
-logical. If TRUE opens the directory of the base install packages
+  \item{open}{logical. If TRUE opens the directory of the
+  base install packages}
 }
+\description{
+  List all the packages in a base install
 }
-
 \note{
-PAckages that are installed when R starts are marked with an asterisk(*)
-}
-\seealso{
-\code{\link[base]{getOption}}
+  Packages that are installed when R starts are marked with
+  an asterisk(*)
 }
 \examples{
 p_base()
 p_base(TRUE)
 }
-% Add one or more standard keywords, see file 'KEYWORDS' in the
-% R documentation directory.
+\seealso{
+  \code{\link[base]{getOption}}
+}
 \keyword{base}
-\keyword{package}
+\keyword{package}
+

man/p_citation.Rd

@@ -1,31 +1,24 @@
 \name{p_citation}
 \alias{p_citation}
 \alias{p_cite}
-%- Also NEED an '\alias' for EACH other topic documented here.
-\title{
-Generate citation for a package
-}
-\description{
-Generate citation for a package  
-}
+\title{Generate citation for a package}
 \usage{
-p_citation(package = "r")
-p_cite(package = "r")
+  p_citation(package = "r")
 }
-%- maybe also 'usage' for other objects documented here.
 \arguments{
-  \item{package}{
-name of package
-}
+  \item{package}{Name of the package you want a citation
+  for}
 }
-\seealso{
-\code{\link[utils]{citation}}
+\description{
+  Generate citation for a package
 }
 \examples{
 p_cite(pacman)
 p_citation(pacman)
 }
-% Add one or more standard keywords, see file 'KEYWORDS' in the
-% R documentation directory.
+\seealso{
+  \code{\link[utils]{citation}}
+}
 \keyword{citation}
-\keyword{cite}% __ONLY ONE__ keyword per line
+\keyword{cite}
+