Convex optimization for statistics and machine learning

Reproducible data analysis for "Inferring causal genotype-phenotype relationships for population-sampled parent-child trios" by Tang, Cabreros, and Storey

Official Github for Wharton STAT 4830

Animation engine for explanatory math videos

Compositional Linear Algebra

A lightweight version of R Markdown

R package wrapping the Python package adelie.

A fast and flexible Python package for efficiently solving lasso, elastic net, group lasso, and group elastic net problems.

R toolkit for single cell genomics

Clarabel.jl: Interior-point solver for convex conic optimisation problems in Julia.

Advanced Topics in Causal Inference PLSC 40601

Accurate sample inference from amplicon data with single nucleotide resolution

DSL for experimental design and statistical analysis

The course text for MIT 6.832 (and 6.832x on edX)

Universal Scene Description

RNA-seq aligner

COIN-OR Interior Point Optimizer IPOPT

Materials and syllabus for Cornell ORIE 7391, Faster: Algorithmic Ideas for Speeding Up Optimization

Proximal Learning for Individualized Treatment Regimes Under Unmeasured Confounding

An open-source C++ library developed and used at Facebook.

Fast exhaustive tree search for policy learning

data repository for publicly available code and data of "Low-intensity fires mitigate the risk of catastrophic wildfires in California's forests"

UC Berkeley's software and documentation for Breakthrough Listen data

Fast solver for L1-type problems: Lasso, sparse Logisitic regression, Group Lasso, weighted Lasso, Multitask Lasso, etc.

Metalearners for Survival Data

Independent Hypothesis Weighting for multiple testing with side-information in Julia