Skip to content
View erinyoung's full-sized avatar

Organizations

@UPHL-BioNGS

Block or report erinyoung

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Please don't include any personal information such as legal names or email addresses. Maximum 100 characters, markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
12 results for forked starred repositories
Clear filter

RSV-B lineage definitions and proposals

1 Updated Nov 18, 2024

Pandas DataFrames for phylogenetics

Python 1 1 Updated Jun 6, 2021

A reference-based viral consensus genome assembly pipeline

Nextflow 7 Updated Nov 21, 2024

CDCgov/mycosnp-nf

Nextflow 3 Updated Aug 6, 2024

The ARTIC field bioinformatics pipeline

Python 117 67 Updated Dec 18, 2024

Python script(s) for assigning allele codes under current PulseNet nomenclature system in BioNumerics but as a command-line executable without BioNumerics dependencies

Python 3 Updated Apr 14, 2024

emm Automatic Isolate Labeller

Jupyter Notebook 10 4 Updated Sep 16, 2024

📦 🐳 Dockerfiles and documentation on tools for public health bioinformatics

HTML 1 Updated Jun 30, 2023

Get all of the files changed/modified in a pull request or push's commits.

TypeScript 66 21 Updated Jun 18, 2024

📦 🐳 Dockerfiles and documentation on tools for public health bioinformatics

HTML 1 Updated May 4, 2023

iVar is a computational package that contains functions broadly useful for viral amplicon-based sequencing.

C++ 119 41 Updated Dec 17, 2024

MultiQC plugin for the National Genomics Infrastructure in Stockholm, Sweden.

Python 3 Updated Aug 4, 2023