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1. genotype-files-manipulations genotype-files-manipulations Public

   Set of scripts to manupulate tab-delimited genotype calls files as well as to convert calls-files to other popular formats.

   Python 10 2

2. phasing-genomes phasing-genomes Public

   Pipeline to phase a genome into two homeologous subgenomes. Parental genomes are required.

   Python 9 1

3. allele-specific-expression allele-specific-expression Public

   Forked from daskelly/ase

   Pipeline to perform the allele-specific expression analysis (based on the work by Skelly et al. 2011)

   R 11 7

4. population-genetic-analyses population-genetic-analyses Public

   Set of tools to perform various population genetic analyses on genomic data

   Python 3 1

5. phylogenetic-analyses phylogenetic-analyses Public

   Scripts to perform various phylogenetic analyses on genomic data

   Python 1

6. bioinformatic-pipelines bioinformatic-pipelines Public

   Pipelines for various genomic analyses

   HTML 3 4