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  • farchaab Public

    Updated Dec 21, 2024
  • zAMPExplorer

    R Updated Dec 20, 2024
  • Nextflow pipeline to benchmark two shotgun metagenomic communities simulators

    Nextflow MIT License Updated Oct 3, 2024
  • wobbler Public

    Tool to get degenerate sites from primer alignments

    Python MIT License Updated Sep 12, 2024
  • Conda recipes for the bioconda channel.

    Shell MIT License Updated Sep 12, 2024
  • Pipelines dealing with high throughput sequencing data for microbiology diagnostic procedures. Documentation available at http://metagenlabdiag-pipelines.readthedocs.io/en/latest/ and Docker images…

    Python Updated May 28, 2024
  • ampliseq Public

    Forked from nf-core/ampliseq

    Amplicon sequencing analysis workflow using DADA2 and QIIME2

    Nextflow MIT License Updated Apr 26, 2024
  • MultiQC Public

    Forked from MultiQC/MultiQC

    Aggregate results from bioinformatics analyses across many samples into a single report.

    Python GNU General Public License v3.0 Updated Nov 21, 2023
  • A place to submit conda recipes before they become fully fledged conda-forge feedstocks

    Python BSD 3-Clause "New" or "Revised" License Updated Oct 24, 2023
  • hackmd Public

    Updated Jun 25, 2023