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R Package for Single-Cell Dataset Processing and Visualization
Clinical Histopathology Imaging Evaluation Foundation Model
CytoTRACE 2 is an interpretable AI method for predicting cellular potency and absolute developmental potential from scRNA-seq data.
This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Proteomic Profiling Reveals the Cellular Composition and Spatia…
Quantifying metabolism activity at the single-cell resolution
microsatellite instability detection using tumor only or paired tumor-normal data
The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants
scripts to automatically update ANNOVAR db
Microsatellite Analysis for Normal-Tumor InStability
❗ This is a read-only mirror of the CRAN R package repository. sequenza — Copy Number Estimation from Tumor Genome Sequencing Data. Homepage: https://sequenzatools.bitbucket.io, Mailing list: https…
Graph-based alignment (Hierarchical Graph FM index)
MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence database.
Simple Cowtransfer Uploader/Downloader in Golang
State-of-the-Art Deep Learning scripts organized by models - easy to train and deploy with reproducible accuracy and performance on enterprise-grade infrastructure.
深度学习500问，以问答形式对常用的概率知识、线性代数、机器学习、深度学习、计算机视觉等热点问题进行阐述，以帮助自己及有需要的读者。 全书分为18个章节，50余万字。由于水平有限，书中不妥之处恳请广大读者批评指正。 未完待续............ 如有意合作，联系[email protected] 版权所有，违权必究 Tan 2018.06
Collection of modular Cytoscape tutorials for online presentation using reveal.js
Single-cell analysis in Python. Scales to >1M cells.
SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.
Infer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy.