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@fowler-lab

Predicting AMR de novo

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  1. pyniverse pyniverse Public

    generic Python package for parsing, analysing and plotting Zooniverse data classification export files

    Python 6 1

  2. who_catalogue_conversion who_catalogue_conversion Public

    Convert mutations from the WHO TB catalogue to GARC

    Python 3

  3. sbmlcore sbmlcore Public

    Collection of core classes and functions for structure-based machine learning to predict antimicrobial resistance

    Python 3

  4. tb-rnap-compensation tb-rnap-compensation Public

    Investigation of the role of compensatory mutations in rifamycin resistance in M. tuberculosis

    Jupyter Notebook 2 2

  5. amygda amygda Public

    Automated Mycobacterial Growth Detection Algorithm, funded by NIHR Oxford Biomedical Research Centre

    Python 1 4

  6. Protein-Mutation-Viewer Protein-Mutation-Viewer Public

    HTML 1 1

Repositories

Showing 10 of 21 repositories
  • intreg Public

    A Python implementation of interval regression

    fowler-lab/intreg’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Dec 20, 2024
  • fowler-lab/predict-rifampicin-resistance’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Dec 18, 2024
  • tb-bdq-cat Public
    fowler-lab/tb-bdq-cat’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 1 Updated Dec 14, 2024
  • validate-myco-amr Public

    Data and code to validate the second version of the WHO catalogue of resistance-associated variants in tuberculosis

    fowler-lab/validate-myco-amr’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Dec 12, 2024
  • tb-rnap-compensation Public

    Investigation of the role of compensatory mutations in rifamycin resistance in M. tuberculosis

    fowler-lab/tb-rnap-compensation’s past year of commit activity
    Jupyter Notebook 2 MIT 2 0 0 Updated Nov 29, 2024
  • sbmlcore Public

    Collection of core classes and functions for structure-based machine learning to predict antimicrobial resistance

    fowler-lab/sbmlcore’s past year of commit activity
    Python 3 MIT 0 3 0 Updated Aug 21, 2024
  • amygda Public

    Automated Mycobacterial Growth Detection Algorithm, funded by NIHR Oxford Biomedical Research Centre

    fowler-lab/amygda’s past year of commit activity
    Python 1 4 0 0 Updated Jun 6, 2024
  • fowler-lab/predict-pyrazinamide-resistance’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Mar 6, 2024
  • who_catalogue_conversion Public

    Convert mutations from the WHO TB catalogue to GARC

    fowler-lab/who_catalogue_conversion’s past year of commit activity
    Python 3 0 0 0 Updated Feb 9, 2024
  • bashthebug Public
    fowler-lab/bashthebug’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 29, 2023

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