Skip to content

Issues: frankvogt/vcf2gwas

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

20 Open 24 Closed
20 Open 24 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

run error
#47 opened Jul 5, 2024 by Xugh1
vcf2gwas breaking
#46 opened Jun 20, 2024 by glaudelrio
Unable to successfully install vcf2gwas in new conda environment - numpy dependency version problems
#45 opened May 23, 2024 by TobyBaril
2
PLINK requires Sex Info
#44 opened May 20, 2024 by maxx694
Variants analysed fewer than the input VCF's SNPs
#43 opened Apr 30, 2024 by KarinaGuo
ModuleNotFoundError: No module named 'umap'
#42 opened Apr 17, 2024 by biopelayo
ChildProcessError
#41 opened Mar 13, 2024 by Lattesnow
1
The process stop
#40 opened Nov 1, 2023 by nibrasissa
Unable to install in new conda environment
#39 opened Aug 11, 2023 by jeremysutherland
4
Can't view Manhattan and QQ-plots
#36 opened Jul 13, 2023 by TinaNeik339
can't update to new version v0.8.9
#35 opened Jun 26, 2023 by vinod1981
number of analyzed SNPs = 0
#34 opened Jun 14, 2023 by MooseyGoosey
Info: No SNPs could be compared to genes, please check the species or gene file selection
#33 opened Jun 8, 2023 by jeremysutherland
Logistic regression?
#31 opened Jun 1, 2023 by Jolleboll
Problem installing in fresh conda environment.
#23 opened Mar 17, 2023 by Old-Green-Man
4
Error: missing 1 required positional argument: 'dir_temp'
#21 opened Feb 20, 2023 by adrianodemarino
4
hello, I have recently been trying to use vcf2gwas, but I have encountered the following issues. Can you please advise me on how to solve them?
#19 opened Feb 15, 2023 by zxljiqixuexi
3
Output results folders contain blank spaces
#16 opened Aug 3, 2022 by vinod1981
4
error
#13 opened Jul 22, 2022 by adriludwig
1
Specify covariates file and PCA
#12 opened Jun 22, 2022 by llniu
6
ProTip! Exclude everything labeled bug with -label:bug.