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National Cancer Center Research Institute
- Tokyo
- https://www.ncc.go.jp/en/ri/division/genome_analysis_platform_development/index.html
- https://friend1ws.github.io
- @friend1_ws
Highlights
- Pro
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ascairn Public
Centromere sequence analysis using rare k-mer markers
Python GNU General Public License v3.0 UpdatedDec 18, 2024 -
ascairn_resource Public
Resource repository for ascairn package
GNU General Public License v3.0 UpdatedDec 18, 2024 -
nanomonsv Public
SV detection tool for nanopore sequence reads
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ggseqlogo Public
A lightweight package for generating sequence logos based on ggplot2
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iravnet Public
intron retention associated variant detection project
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SAVNet Public
detection of mutations causing splicing change
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junc_utils Public
utility functions for analyzing splicing junction
Python GNU General Public License v3.0 UpdatedApr 23, 2021 -
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alpha-CENTAURI Public
Forked from volkansevim/alpha-CENTAURIA python package from Pacific Biosciences to analyze centromeric sequences
Python UpdatedSep 16, 2020 -
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sv_utils Public
package for analyzing GenomonSV results
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intron_retention_utils Public
script for extracting intron retention events
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annot_utils Public
scripts processing annotation data from UCSC
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pmsignature Public
R package for extracting mutation signatures from a list of somatic mutations
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Complete-Striped-Smith-Waterman-Library Public
Forked from mengyao/Complete-Striped-Smith-Waterman-LibraryC UpdatedJun 2, 2019 -
chimera_utils Public
programs for processing chimeric reads generated at a STAR alignment step
Python GNU General Public License v3.0 UpdatedMay 18, 2019