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Commits on Mar 20, 2018

• added cpos and cend to merge output

  fritzsedlazeck

  committed
  9154484

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Commits on Mar 16, 2018

• Changed VCF header of merge

  fritzsedlazeck

  committed
  873be34

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Commits on Mar 15, 2018

• Updating make file

  fritzsedlazeck

  committed
  f109e24

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• Added parser to update SNP vcf with phasing information for Hapcut2

  fritzsedlazeck

  committed
  6afac2c

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Commits on Mar 14, 2018

• Added bedpe to vcf parser

  fritzsedlazeck

  committed
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Commits on Mar 13, 2018

• Merge pull request #23 from wdecoster/patch-1

  Show description for cbace32
  fritzsedlazeck

  authored
  cbace32

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• fix typo

  wdecoster

  authored
  24c814e

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Commits on Mar 8, 2018

• Fixed R script

  fritzsedlazeck

  committed
  d321e86

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Commits on Mar 7, 2018

• Interface fix for simreads

  fritzsedlazeck

  committed
  4c99095

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Commits on Mar 6, 2018

• Scanreads bug fix

  fritzsedlazeck

  committed
  f40c2e2

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Commits on Feb 28, 2018

• avoid clipping of chr

  fritzsedlazeck

  committed
  0138d34

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• changed makefile

  fritzsedlazeck

  committed
  e65234f

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Commits on Feb 27, 2018

• Added AF filtering and automated subsample selection (beta)

  fritzsedlazeck

  committed
  50753ff

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• Added contig ids in VCF header for merge

  fritzsedlazeck

  committed
  6fc5090

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Commits on Feb 22, 2018

• Changed keeping chr in chrname

  fritzsedlazeck

  committed
  66371ae

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• Changed Support calc for merge

  fritzsedlazeck

  committed
  c6027e1

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Commits on Feb 21, 2018

• Added sample name support for merging

  fritzsedlazeck

  committed
  6c61701

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Commits on Feb 15, 2018

• Bugfix vcftobed

  fritzsedlazeck

  committed
  468a488

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• Changes in filtering of SVs

  fritzsedlazeck

  committed
  a7d0d6c

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Commits on Feb 5, 2018

• Added support filter for filter VCF

  fritzsedlazeck

  committed
  1c0fdb2

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• Corrected typo in mummer function call

  fritzsedlazeck

  committed
  0797c9d

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Commits on Jan 30, 2018

• Changed VCFID in vcftobed

  fritzsedlazeck

  committed
  030c19d

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• Changed VCFID in vcftobed

  fritzsedlazeck

  committed
  73717fc

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• Changed VCFID in vcftobed

  fritzsedlazeck

  committed
  a182c87

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• Added filtering, new interface

  fritzsedlazeck

  committed
  18178a8

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Commits on Jan 19, 2018

• Updated reading ref for sim SVS

  fritzsedlazeck

  committed
  2f5f94e

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Commits on Jan 18, 2018

• Updated make file

  fritzsedlazeck

  committed
  c90a566

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• Added a comp between SVS and mummer calls

  fritzsedlazeck

  committed
  d8ecbc4

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Commits on Dec 14, 2017

• Update combine_svs.cpp

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  mschatz

  authored
  dc91383

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Commits on Oct 6, 2017

• Fixed genotype parsing

  fritzsedlazeck

  committed
  26db1e4

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• update makefile

  fritzsedlazeck

  committed
  80d28a1

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Commits on Oct 5, 2017

• Fixed empty lines in SV simulation

  fritzsedlazeck

  committed
  d5e03d5

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Commits on Sep 28, 2017

• Update README.md

  fritzsedlazeck

  authored
  c021da0

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• Update notice

  fritzsedlazeck

  authored
  3676eea

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Commits on Sep 8, 2017

• Updated options.

  fritzsedlazeck

  authored
  d12df45

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