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Improved merging

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@fritzsedlazeck fritzsedlazeck released this 26 Nov 03:01
· 28 commits to master since this release

Update on merging:

  • Improved insertion based merging taking the length into account
  • Enabling distance to be a function of the length of the SVs
  • Improved output including CIPOS CIEND and additional GT fields
  • Tracking of VCF ID through merges
  • Report merged sequence information
  • Various improvements in output VCF file

Update on filter conversion:

  • Bugfix in length threshold if SV len is different than breakpoint distances.