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Commits on Feb 22, 2020

• Show All Chrom view when search is "*" (igvteam#757)

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  amwenger

  and

  jrobinso

  authored
  8ef83af

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Commits on Nov 21, 2019

• Add right-click menu items to BLAT soft-clipped sequence (igvteam#728)

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  amwenger

  authored and

  jrobinso

  committed
  2ea86fd

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Commits on Nov 20, 2018

• Limit font for DNA letters by both X and Y (igvteam#605)

  

  amwenger

  authored and

  jrobinso

  committed
  3e556a7

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• Improve insertion markers / expanded insertions logic (igvteam#606)

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  amwenger

  authored and

  jrobinso

  committed
  b69b270

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Commits on Nov 19, 2018

• More flexible parsing of ZMW and movie name (igvteam#603)

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  amwenger

  authored and

  jrobinso

  committed
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Commits on Mar 30, 2018

• Be robust to invalid SA entries

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  amwenger

  committed
  1ef9214

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Commits on Jan 6, 2017

• Only list suppressed tags as hidden in alignment popup

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  amwenger

  committed
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• Made indel size labels on by default

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  amwenger

  committed
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• Support pointed arrow heads in BAM collapsed mode

  amwenger

  committed
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• Introduce "collapsed" BAM alignment track display

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  amwenger

  committed
  c961101

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Commits on Jan 5, 2017

• Clean up display of base and indel labels

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  amwenger

  committed
  38f685e

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• Cleanup drawing of clip indicator

  amwenger

  committed
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Commits on Jan 4, 2017

• Use 5px height instead of 4px for squished alignments

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  amwenger

  committed
  c6cf23e

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• Avoid thick strokes in squished mode

  amwenger

  committed
  04953c2

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• Improve insertion display in squished mode

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  amwenger

  committed
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• Do not draw indel size text labels in squished mode

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  amwenger

  committed
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• Create graphics for drawing strand indicator lines

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  amwenger

  committed
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Commits on Dec 23, 2016

• Drop "hide indels < N pixels" option

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  amwenger

  committed
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Commits on Dec 22, 2016

• Avoid unnecessary data reloads

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  amwenger

  committed
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• Remove execute permissions from code file

  amwenger

  committed
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• Drop unnecessary logic

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  amwenger

  committed
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• Bugfix: Make alignment grouping consistent and persistent

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  amwenger

  committed
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• Simplify variable names to better match convention

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  amwenger

  committed
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• Consolidate group by tag and group by position logic

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  committed
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Commits on Dec 21, 2016

• Select all text in search box upon Ctrl/Cmd+L

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  amwenger

  committed
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Commits on Dec 16, 2016

• Highlight clipped alignment edges

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  amwenger

  committed
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• Merge branch 'master' into amw-highlight-read-clipping

  amwenger

  committed
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• Indicate read clipping

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  committed
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Commits on Dec 15, 2016

• Add Ctrl+L and Cmd+L hotkey to focus on search box

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  amwenger

  committed
  c70c019

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• Fix "or/of" typo in search box tooltip

  amwenger

  committed
  a435edc

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• Avoid mismatches in zero quality columns

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  amwenger

  committed
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Commits on Aug 15, 2016

• Clarify wording of indel hiding options

  amwenger

  committed
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• Match indel hiding logic to the wording of the option

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  amwenger

  committed
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• Treat pixel width as a double for comparison to threshold

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  amwenger

  committed
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• Store insertion length in variable to improve readability

  amwenger

  committed
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