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15 Open 23 Closed
15 Open 23 Closed
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Issues list

L-BFGS-B needs finite values of 'fn'
#72 opened Nov 5, 2024 by hanxuelian
4
No Aberrant Expression was found in Targeted Panel RNA Sequence Data
#70 opened Aug 21, 2024 by ellango85
7
Error in findEncodingDim: deprecated pandas.DataFrame.append pandas>=2.0
#60 opened Oct 30, 2023 by m-pauper
1
PROTRIDER questions
#59 opened Oct 30, 2023 by m-pauper
1
The difference in sequencing volume and OUTRIDER
#57 opened Feb 28, 2023 by zyyy97
5
Errors in the codes from pdf OUTRIDER - OUTlier in RNA-Seq fInDER
#42 opened Jul 14, 2022 by Paranchai
1
findEncodingDims Out-of-Memory Issues
#40 opened Jun 21, 2022 by lemdcock
5
findEncodingDim issues
#39 opened Jun 14, 2022 by lemdcock
5
Predefined covariates
#38 opened May 19, 2022 by gk1610
findEncodingDim running issues
#36 opened Oct 6, 2021 by runjin326
2
Validation data set not producing values concordant with manual
#34 opened Sep 6, 2021 by J-Lye
1
sample swaps: OutriderDataSet(countData=cts, colData=anno) makes undocumented(?) assumption that "cts" columns have same order as "anno" rows, leading to results with incorrect sample labels when this is not met.
#32 opened Feb 10, 2021 by bw2
findEncodingDim always uses all avaialble cores
#26 opened Aug 6, 2020 by emariella
@c-mertes
1
Always hangs during autoencoding
#18 opened Nov 27, 2019 by furbelows
@brechtmann
5
controlForConfounders uses as much memory as available on machine
#11 opened Dec 4, 2018 by WGarrettJenkinson
14
ProTip! Find all open issues with in progress development work with linked:pr.