PERF: Employ mask for jlf-ization of SST

gandreadis · Nov 23, 2015 · 6f2ac05 · 6f2ac05
1 parent 921dc29
commit 6f2ac05
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/Scripts/antsLongitudinalCorticalThickness.sh b/Scripts/antsLongitudinalCorticalThickness.sh
@@ -786,6 +786,7 @@ if [[ ${SINGLE_SUBJECT_TEMPLATE_PRIORS_EXIST} -eq 0 ]];
             logCmd ${ANTSPATH}/antsJointLabelFusion.sh \
               -d ${DIMENSION} \
               -q ${RUN_FAST_MALF_COOKING} \
+              -x ${SINGLE_SUBJECT_TEMPLATE_EXTRACTION_MASK} \
               -c ${DOQSUB} \
               -j ${CORES} \
               -t ${SINGLE_SUBJECT_TEMPLATE_SKULL_STRIPPED} \