Tags: grantn5/infercnvpy
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[pre-commit.ci] pre-commit autoupdate (icbi-lab#120) * [pre-commit.ci] pre-commit autoupdate updates: - [github.com/pre-commit/mirrors-prettier: v3.0.3 → v4.0.0-alpha.8](pre-commit/mirrors-prettier@v3.0.3...v4.0.0-alpha.8) - [github.com/astral-sh/ruff-pre-commit: v0.1.9 → v0.2.2](astral-sh/ruff-pre-commit@v0.1.9...v0.2.2) * Update .pre-commit-config.yaml --------- Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> Co-authored-by: Gregor Sturm <[email protected]>
Update gtfparse version requirement (icbi-lab#118) * Update gtfparse version requirement In 00ece88, gtfparse version was pinned to <2 because of conflicts between gtfparse and recent versions of polars. Since 12/21/23, with gtfparse v. 2.1.0, the conflicts have been eliminated, so there is no need to keep older versions pinned. * Convert polars GTF to pandas --------- Co-authored-by: Gregor Sturm <[email protected]> Co-authored-by: Gregor Sturm <[email protected]>
allow heatmap to use user's dendrogram (icbi-lab#72) Co-authored-by: Gregor Sturm <[email protected]>
Automated template update from cookiecutter-scverse (icbi-lab#61) * Update sync.yaml * Automated template update from cookiecutter-scverse * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * fix merge conflicts * Fix merge conflict Co-authored-by: Gregor Sturm <[email protected]> Co-authored-by: grst <[email protected]> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> Co-authored-by: Gregor Sturm <[email protected]>
Merge pull request icbi-lab#35 from elisapanizzolo/patch-2 default key_added fix
Merge pull request icbi-lab#21 from icbi-lab/copykat copyKAT function
Merge pull request icbi-lab#19 from icbi-lab/fix-plotting-dense-matrix fix plotting dense matrix
Merge pull request icbi-lab#16 from icbi-lab/fix-15 Reorder chr_pos dict before plotting heatmap
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