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Generic implementation of deploying helm charts on AWS EKS with DNS management in Route53

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Terraform AWS EKS Helm Chart + Route53 Bootstrap Module

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This module is meant to bootstrap a lot of the operations and reduce boilerplate code for a lot of modules I deploy.

  1. Deploy a Helm chart on AWS EKS
  2. (Optionally) create a new or use an existing ingress to serve these.
  3. (Optionally) create the correct DNS entries in AWS Route 53

This project wouldn't be possible without open source software. The conventions used in the terraform recipes come from the CloudPosse group.


This project is part of the "BioAnalyze" project, which aims to make High Performance Compute Architecture accessible to everyone.

It's 100% Open Source and licensed under the APACHE2.

Data Science Infrastructure on AWS

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IMPORTANT: We do not pin modules to versions in our examples because of the difficulty of keeping the versions in the documentation in sync with the latest released versions. We highly recommend that in your code you pin the version to the exact version you are using so that your infrastructure remains stable, and update versions in a systematic way so that they do not catch you by surprise.

Also, because of a bug in the Terraform registry (hashicorp/terraform#21417), the registry shows many of our inputs as required when in fact they are optional. The table below correctly indicates which inputs are required.

For a complete example, see examples/nginx.

Examples

Here is an example of using this module:

Makefile Targets

Available targets:

  help                                Help screen
  help/all                            Display help for all targets
  help/short                          This help short screen
  lint                                Lint terraform code

Requirements

Name Version
terraform >= 0.13
aws >= 3.30.0
helm >= 2.1.2
http >= 2.1.0
kubernetes >= 2.5.0
local >= 1.2
random >= 2.2

Providers

Name Version
aws 3.68.0
helm 2.4.1
kubernetes 2.7.1
local 2.1.0
null 3.1.0
random 3.1.0
template 2.2.0

Modules

Name Source Version
merge_values dabble-of-devops-biodeploy/merge-values/helm >= 0.2.0
this cloudposse/label/null 0.25.0

Resources

Name Type
aws_route53_record.cluster_ip resource
aws_route53_record.load_balancer resource
helm_release.helm resource
local_file.cluster_issuer resource
local_file.rendered_ingress resource
null_resource.create_merged_file resource
null_resource.helm_dirs resource
null_resource.kubectl_apply_cluster_issuer resource
null_resource.sleep_helm_update resource
random_string.computed_values resource
aws_elb.load_balancer data source
kubernetes_service.load_balancer data source
template_file.cluster_issuer data source
template_file.ingress data source

Inputs

Name Description Type Default Required
additional_tag_map Additional key-value pairs to add to each map in tags_as_list_of_maps. Not added to tags or id.
This is for some rare cases where resources want additional configuration of tags
and therefore take a list of maps with tag key, value, and additional configuration.
map(string) {} no
attributes ID element. Additional attributes (e.g. workers or cluster) to add to id,
in the order they appear in the list. New attributes are appended to the
end of the list. The elements of the list are joined by the delimiter
and treated as a single ID element.
list(string) [] no
aws_elb_dns_name Pass in the aws_elb ingress here string "" no
aws_elb_zone_id Pass in the aws_elb ingress here any "" no
aws_route53_record_name Record name to add to aws_route_53. Must be a valid subdomain - www,app,etc string "www" no
aws_route53_zone_id Pass in the aws_elb ingress here string "" no
aws_route53_zone_name Name of the zone to add records. Do not forget the trailing '.' - 'test.com.' string "test.com." no
cluster_issuer_template Path to cluster issuer template. Default cluster issuer is supplied. string "" no
context Single object for setting entire context at once.
See description of individual variables for details.
Leave string and numeric variables as null to use default value.
Individual variable settings (non-null) override settings in context object,
except for attributes, tags, and additional_tag_map, which are merged.
any
{
"additional_tag_map": {},
"attributes": [],
"delimiter": null,
"descriptor_formats": {},
"enabled": true,
"environment": null,
"id_length_limit": null,
"label_key_case": null,
"label_order": [],
"label_value_case": null,
"labels_as_tags": [
"unset"
],
"name": null,
"namespace": null,
"regex_replace_chars": null,
"stage": null,
"tags": {},
"tenant": null
}
no
delimiter Delimiter to be used between ID elements.
Defaults to - (hyphen). Set to "" to use no delimiter at all.
string null no
descriptor_formats Describe additional descriptors to be output in the descriptors output map.
Map of maps. Keys are names of descriptors. Values are maps of the form
{<br> format = string<br> labels = list(string)<br>}
(Type is any so the map values can later be enhanced to provide additional options.)
format is a Terraform format string to be passed to the format() function.
labels is a list of labels, in order, to pass to format() function.
Label values will be normalized before being passed to format() so they will be
identical to how they appear in id.
Default is {} (descriptors output will be empty).
any {} no
enable_ssl Enable SSL Support? bool true no
enabled Set to false to prevent the module from creating any resources bool null no
environment ID element. Usually used for region e.g. 'uw2', 'us-west-2', OR role 'prod', 'staging', 'dev', 'UAT' string null no
existing_ingress_name Existing ingress release name string "nginx-ingress-ingress-nginx-ingress-controller" no
existing_ingress_namespace Existing ingress release namespace string "default" no
helm_release_chart helm release chart string "airflow" no
helm_release_create_namespace Create namespace if it does not exist bool true no
helm_release_merged_values_file Path to merged helm files. If blank one will be calculated for you. string "" no
helm_release_name helm release name string "helm" no
helm_release_namespace helm release namespace string "default" no
helm_release_repository helm release chart repository string "https://charts.bitnami.com/bitnami" no
helm_release_sets Variable sets list(object({ name = string, value = string, type = string })) [] no
helm_release_values_dir Directory to put rendered values template files or additional keys. Should be helm_charts/{helm_release_name} string "helm_charts" no
helm_release_values_files helm release values files - paths values files to add to helm install --values {} list(string) [] no
helm_release_values_service_type Service type. Must be one of LoadBalancer or ClusterIP. If using enable_ssl=true the service type should be ClusterIP string "ClusterIP" no
helm_release_version helm release version string "11.0.8" no
helm_release_wait Tell terraform to wait until the service comes up. bool true no
id_length_limit Limit id to this many characters (minimum 6).
Set to 0 for unlimited length.
Set to null for keep the existing setting, which defaults to 0.
Does not affect id_full.
number null no
ingress_template Path to ingress template. Ingress compatible with bitnami is given. string "" no
install_ingress Deprecated: Install the ingress helm chart. No will only fill out the cluster issuer, yes fills out the cluster issuer and installs. bool true no
label_key_case Controls the letter case of the tags keys (label names) for tags generated by this module.
Does not affect keys of tags passed in via the tags input.
Possible values: lower, title, upper.
Default value: title.
string null no
label_order The order in which the labels (ID elements) appear in the id.
Defaults to ["namespace", "environment", "stage", "name", "attributes"].
You can omit any of the 6 labels ("tenant" is the 6th), but at least one must be present.
list(string) null no
label_value_case Controls the letter case of ID elements (labels) as included in id,
set as tag values, and output by this module individually.
Does not affect values of tags passed in via the tags input.
Possible values: lower, title, upper and none (no transformation).
Set this to title and set delimiter to "" to yield Pascal Case IDs.
Default value: lower.
string null no
labels_as_tags Set of labels (ID elements) to include as tags in the tags output.
Default is to include all labels.
Tags with empty values will not be included in the tags output.
Set to [] to suppress all generated tags.
Notes:
The value of the name tag, if included, will be the id, not the name.
Unlike other null-label inputs, the initial setting of labels_as_tags cannot be
changed in later chained modules. Attempts to change it will be silently ignored.
set(string)
[
"default"
]
no
letsencrypt_email Email to use for https setup. Not needed unless enable_ssl string "[email protected]" no
name ID element. Usually the component or solution name, e.g. 'app' or 'jenkins'.
This is the only ID element not also included as a tag.
The "name" tag is set to the full id string. There is no tag with the value of the name input.
string null no
namespace ID element. Usually an abbreviation of your organization name, e.g. 'eg' or 'cp', to help ensure generated IDs are globally unique string null no
regex_replace_chars Terraform regular expression (regex) string.
Characters matching the regex will be removed from the ID elements.
If not set, "/[^a-zA-Z0-9-]/" is used to remove all characters other than hyphens, letters and digits.
string null no
region AWS Region string "us-east-1" no
render_cluster_issuer Create a cluster-issuer.yaml file bool true no
render_ingress Render ingress.yaml file - only useful if installing an additional service such as nginx bool true no
stage ID element. Usually used to indicate role, e.g. 'prod', 'staging', 'source', 'build', 'test', 'deploy', 'release' string null no
tags Additional tags (e.g. {'BusinessUnit': 'XYZ'}).
Neither the tag keys nor the tag values will be modified by this module.
map(string) {} no
tenant ID element _(Rarely used, not included by default)_. A customer identifier, indicating who this instance of a resource is for string null no
use_existing_ingress Use existing ingress bool false no

Outputs

Name Description
aws_elb_load_balancer n/a
aws_route53_record_cluster_ip n/a
aws_route53_record_load_balancer n/a
helm_release n/a
id ID of the created example
kubernetes_service_helm n/a
ssl_type n/a

Share the Love

Like this project? Please give it a ★ on our GitHub! (it helps a lot)

Related Projects

Check out these related projects.

  • terraform-aws-eks-autoscaling - Terraform module to provision an Autoscaling EKS Cluster. Acts as a wrapper around cloudposse/terraform-aws-eks-cluster and cloudposse/terraform-aws-eks-node-groups
  • terraform-aws-eks-cluster - Terraform module to deploy an AWS EKS Cluster.
  • terraform-aws-eks-node-group - Terraform module to provision an EKS Node Group
  • Zero to Kubernetes - JupyterHub allows users to interact with a computing environment through a webpage. As most devices have access to a web browser, JupyterHub makes it is easy to provide and standardize the computing environment for a group of people (e.g., for a class of students or an analytics team).

This project will help you set up your own JupyterHub on a cloud/on-prem k8s environment and leverage its scalable nature to support a large group of users. Thanks to Kubernetes, we are not tied to a specific cloud provider.

  • Dask Gateway - Dask Gateway provides a secure, multi-tenant server for managing Dask clusters. It allows users to launch and use Dask clusters in a shared, centrally managed cluster environment, without requiring users to have direct access to the underlying cluster backend (e.g. Kubernetes, Hadoop/YARN, HPC Job queues, etc…).

  • DaskHub - This chart provides a multi-user, Dask-Gateway enabled JupyterHub. It combines the JupyterHub and Dask Gateway helm charts.

  • Dask - Dask is a flexible library for parallel computing in Python.

  • terraform-aws-ec2-autoscale-group - Terraform module to provision Auto Scaling Group and Launch Template on AWS

  • terraform-aws-ec2-instance - Terraform module for providing a general purpose EC2 instance

  • terraform-aws-ec2-instance-group - Terraform module for provisioning multiple general purpose EC2 hosts for stateful applications

  • terraform-null-label - Terraform module designed to generate consistent names and tags for resources. Use terraform-null-label to implement a strict naming convention.

References

For additional context, refer to some of these links.

  • Terraform Standard Module Structure - HashiCorp's standard module structure is a file and directory layout we recommend for reusable modules distributed in separate repositories.
  • Terraform Module Requirements - HashiCorp's guidance on all the requirements for publishing a module. Meeting the requirements for publishing a module is extremely easy.
  • Terraform random_integer Resource - The resource random_integer generates random values from a given range, described by the min and max attributes of a given resource.
  • Terraform Version Pinning - The required_version setting can be used to constrain which versions of the Terraform CLI can be used with your configuration

Help

Got a question? We got answers.

File a GitHub issue, send us an [email protected].

Bioinformatics Infrastructure on AWS for Startups

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Learn More

Work directly with me via email, slack, and video conferencing.

  • Scientific Workflow Automation and Optimization. Got workflows that are giving you trouble? Let's work together to ensure that your analyses run with or without your scientists being fully caffeinated.
  • High Performance Compute Infrastructure. Highly available, auto scaling clusters to analyze all the (bioinformatics related!) things. All setups are completely integrated with your workflow system of choice, whether that is Airflow, Prefect, Snakemake or Nextflow.
  • Kubernetes and AWS Batch Setup for Apache Airflow Orchestrate your Bioinformatics Workflows with Apache Airflow. Get full auditing, SLA, logging and monitoring for your workflows running on AWS Batch.
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  • Bug Fixes. We'll rapidly work with you to fix any bugs in our projects.

Contributing

Bug Reports & Feature Requests

Please use the issue tracker to report any bugs or file feature requests.

Developing

If you are interested in being a contributor and want to get involved in developing this project or help out with other projects, I would love to hear from you! Shoot me an email at [email protected].

In general, PRs are welcome. We follow the typical "fork-and-pull" Git workflow.

  1. Fork the repo on GitHub
  2. Clone the project to your own machine
  3. Commit changes to your own branch
  4. Push your work back up to your fork
  5. Submit a Pull Request so that we can review your changes

Developer Notes

The README.md is created using the standard CloudPosse template that has been modified to use BioAnalyze information and URLs, and other documentation is generated using jupyter-book.

Terraform code does not render properly when using the literalinclude directive, so instead we use pygmentize to render it to html which is included directly.

.. raw:: html
   :file: ./_html/main.tf.html

NOTE: Be sure to merge the latest changes from "upstream" before making a pull request!

Copyrights

Copyright © 2020-2021 Dabble of DevOps, SCorp

License

License

See LICENSE for full details.

Licensed to the Apache Software Foundation (ASF) under one
or more contributor license agreements.  See the NOTICE file
distributed with this work for additional information
regarding copyright ownership.  The ASF licenses this file
to you under the Apache License, Version 2.0 (the
"License"); you may not use this file except in compliance
with the License.  You may obtain a copy of the License at

  https://www.apache.org/licenses/LICENSE-2.0

Unless required by applicable law or agreed to in writing,
software distributed under the License is distributed on an
"AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
KIND, either express or implied.  See the License for the
specific language governing permissions and limitations
under the License.

Trademarks

All other trademarks referenced herein are the property of their respective owners.

Contributors

| Jillian Rowe
Jillian Rowe |

Learn more at Dabble of DevOps

Sponsor

BioAnalyze is and will always be open source. If you've found any of these resources helpful, please consider donating to the continued development of BioAnalyze.

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Generic implementation of deploying helm charts on AWS EKS with DNS management in Route53

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