Replace imp with importlib
#3
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| name: Lint Code | |
| on: [pull_request] | |
| jobs: | |
| lint-workflows: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| with: | |
| fetch-depth: 1 | |
| # BEGIN Dependencies | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: '3.7' | |
| architecture: 'x64' | |
| - name: Install dependencies | |
| run: | | |
| pip install -r requirements.txt | |
| pip install -U setuptools | |
| pip install -U planemo | |
| pip install -U flake8 | |
| pip install -U xmldiff | |
| # END Dependencies | |
| - name: Lint 🔍👁👁 | |
| run: | | |
| python setup.py install | |
| flake8 argparse2tool --ignore=E2,E3,E4,E5,W3,W505 | |
| PYTHONPATH=$(argparse2tool) python examples/example.py --generate_galaxy_xml > tmp.xml | |
| xmldiff tmp.xml examples/example.xml | |
| planemo lint --report_level all --fail_level error --xsd tmp.xml | |
| # Galaxy tool generation for example with subparsers -- generating one large (invalid) tool | |
| echo '<root>' > tmp-sub.xml # wrap in extra level | |
| PYTHONPATH=$(argparse2tool) python examples/example-sub.py --generate_galaxy_xml >> tmp-sub.xml | |
| echo '</root>' >> tmp-sub.xml | |
| xmldiff tmp-sub.xml <(echo "<root>"; cat examples/example-sub.xml; echo "</root>") | |
| # Galaxy tool generation for example with subparsers -- generating separate tools | |
| PYTHONPATH=$(argparse2tool) python examples/example-sub.py --generate_galaxy_xml --command foo > tmp-sub-foo.xml | |
| PYTHONPATH=$(argparse2tool) python examples/example-sub.py --generate_galaxy_xml --command bar > tmp-sub-bar.xml | |
| xmldiff tmp-sub-foo.xml examples/example-sub-foo.xml | |
| planemo lint --report_level all --fail_level error --xsd tmp-sub-foo.xml | |
| xmldiff tmp-sub-bar.xml examples/example-sub-bar.xml | |
| planemo lint --report_level all --fail_level error --xsd tmp-sub-bar.xml | |
| PYTHONPATH=$(argparse2tool) python examples/example.py --generate_cwl_tool > tmp.cwl | |
| PYTHONPATH=$(argparse2tool) python examples/example-sub.py --generate_cwl_tool > tmp-sub.cwl | |
| sed -i 's/argparse2tool .*/argparse2tool/g' tmp.cwl tmp-sub.cwl | |
| diff tmp.cwl examples/example.cwl | |
| diff tmp-sub.cwl examples/example-sub.cwl | |
| PYTHONPATH=$(argparse2tool) python examples/example-click.py --generate_cwl_tool > tmp-click.cwl | |
| diff tmp-click.cwl examples/example-click.cwl |