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Experiments proof of concept (iterative#4199)
* experiments: add initial experiments.show * only includes metrics + params (no code/data information) * experiments: basic `dvc experiments show` functionality * experiments: clone and run repro inside clone workspace * repro: add -e/--experiment option * experiments: hash experiments to identify duplicates * experiments: update show * experiments: checkout experiment after running repro * experiments: add `dvc experiments checkout` * experiments: add simple `dvc experiments diff` command * just shows combined output from `metrics diff` and `plots diff` for now * add very simple tests * add some useful output messages * experiments: suppress help messages while feature is in development * experiment related commands will be accessible but hidden from the default command help messages * add simple experiments command tests * experiments: disable feature by default * experiments only enabled in test environment (DVC_TEST) or when core.experiments config option is true * use fetch on checkout missing revs
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Original file line number | Diff line number | Diff line change |
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@@ -9,3 +9,4 @@ | |
/pkg | ||
/repos | ||
/tmp | ||
/experiments |
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Original file line number | Diff line number | Diff line change |
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import argparse | ||
import io | ||
import logging | ||
from collections import OrderedDict | ||
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from dvc.command.base import CmdBase, append_doc_link, fix_subparsers | ||
from dvc.command.metrics import DEFAULT_PRECISION | ||
from dvc.exceptions import DvcException | ||
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logger = logging.getLogger(__name__) | ||
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def _update_names(names, items): | ||
from flatten_json import flatten | ||
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for name, item in items: | ||
if isinstance(item, dict): | ||
item = flatten(item, ".") | ||
names.update(item.keys()) | ||
else: | ||
names.add(name) | ||
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def _collect_names(all_experiments): | ||
metric_names = set() | ||
param_names = set() | ||
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for _, experiments in all_experiments.items(): | ||
for exp in experiments.values(): | ||
_update_names(metric_names, exp.get("metrics", {}).items()) | ||
_update_names(param_names, exp.get("params", {}).items()) | ||
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return sorted(metric_names), sorted(param_names) | ||
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def _collect_rows( | ||
base_rev, experiments, metric_names, param_names, precision=None | ||
): | ||
from flatten_json import flatten | ||
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if precision is None: | ||
precision = DEFAULT_PRECISION | ||
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def _round(val): | ||
if isinstance(val, float): | ||
return round(val, precision) | ||
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return val | ||
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def _extend(row, names, items): | ||
for fname, item in items: | ||
if isinstance(item, dict): | ||
item = flatten(item, ".") | ||
else: | ||
item = {fname: item} | ||
for name in names: | ||
if name in item: | ||
row.append(str(_round(item[name]))) | ||
else: | ||
row.append("-") | ||
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for i, (rev, exp) in enumerate(experiments.items()): | ||
row = [] | ||
style = None | ||
if rev == "baseline": | ||
row.append(f"{base_rev}") | ||
style = "bold" | ||
elif i < len(experiments) - 1: | ||
row.append(f"├── {rev[:7]}") | ||
else: | ||
row.append(f"└── {rev[:7]}") | ||
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_extend(row, metric_names, exp.get("metrics", {}).items()) | ||
_extend(row, param_names, exp.get("params", {}).items()) | ||
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yield row, style | ||
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def _show_experiments(all_experiments, console, precision=None): | ||
from rich.table import Table | ||
from dvc.scm.git import Git | ||
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metric_names, param_names = _collect_names(all_experiments) | ||
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table = Table(row_styles=["white", "bright_white"]) | ||
table.add_column("Experiment", header_style="black on grey93") | ||
for name in metric_names: | ||
table.add_column( | ||
name, justify="right", header_style="black on cornsilk1" | ||
) | ||
for name in param_names: | ||
table.add_column( | ||
name, justify="left", header_style="black on light_cyan1" | ||
) | ||
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for base_rev, experiments in all_experiments.items(): | ||
if Git.is_sha(base_rev): | ||
base_rev = base_rev[:7] | ||
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for row, style, in _collect_rows( | ||
base_rev, | ||
experiments, | ||
metric_names, | ||
param_names, | ||
precision=precision, | ||
): | ||
table.add_row(*row, style=style) | ||
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console.print(table) | ||
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class CmdExperimentsShow(CmdBase): | ||
def run(self): | ||
from rich.console import Console | ||
from dvc.utils.pager import pager | ||
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if not self.repo.experiments: | ||
return 0 | ||
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try: | ||
all_experiments = self.repo.experiments.show( | ||
all_branches=self.args.all_branches, | ||
all_tags=self.args.all_tags, | ||
all_commits=self.args.all_commits, | ||
) | ||
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# Note: rich does not currently include a native way to force | ||
# infinite width for use with a pager | ||
console = Console( | ||
file=io.StringIO(), force_terminal=True, width=9999 | ||
) | ||
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_show_experiments(all_experiments, console) | ||
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pager(console.file.getvalue()) | ||
except DvcException: | ||
logger.exception("failed to show experiments") | ||
return 1 | ||
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return 0 | ||
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class CmdExperimentsCheckout(CmdBase): | ||
def run(self): | ||
if not self.repo.experiments: | ||
return 0 | ||
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self.repo.experiments.checkout( | ||
self.args.experiment, force=self.args.force | ||
) | ||
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return 0 | ||
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def _show_diff( | ||
diff, title="", markdown=False, no_path=False, old=False, precision=None | ||
): | ||
from dvc.utils.diff import table | ||
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if precision is None: | ||
precision = DEFAULT_PRECISION | ||
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def _round(val): | ||
if isinstance(val, float): | ||
return round(val, precision) | ||
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return val | ||
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rows = [] | ||
for fname, diff_ in diff.items(): | ||
sorted_diff = OrderedDict(sorted(diff_.items())) | ||
for item, change in sorted_diff.items(): | ||
row = [] if no_path else [fname] | ||
row.append(item) | ||
if old: | ||
row.append(_round(change.get("old"))) | ||
row.append(_round(change["new"])) | ||
row.append(_round(change.get("diff", "diff not supported"))) | ||
rows.append(row) | ||
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header = [] if no_path else ["Path"] | ||
header.append(title) | ||
if old: | ||
header.extend(["Old", "New"]) | ||
else: | ||
header.append("Value") | ||
header.append("Change") | ||
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return table(header, rows, markdown) | ||
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class CmdExperimentsDiff(CmdBase): | ||
def run(self): | ||
if not self.repo.experiments: | ||
return 0 | ||
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try: | ||
diff = self.repo.experiments.diff( | ||
a_rev=self.args.a_rev, | ||
b_rev=self.args.b_rev, | ||
all=self.args.all, | ||
) | ||
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if self.args.show_json: | ||
import json | ||
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logger.info(json.dumps(diff)) | ||
else: | ||
diffs = [("metrics", "Metric"), ("params", "Param")] | ||
for key, title in diffs: | ||
table = _show_diff( | ||
diff[key], | ||
title=title, | ||
markdown=self.args.show_md, | ||
no_path=self.args.no_path, | ||
old=self.args.old, | ||
precision=self.args.precision, | ||
) | ||
if table: | ||
logger.info(table) | ||
logger.info("") | ||
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except DvcException: | ||
logger.exception("failed to show experiments diff") | ||
return 1 | ||
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return 0 | ||
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def add_parser(subparsers, parent_parser): | ||
EXPERIMENTS_HELP = "Commands to display and compare experiments." | ||
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experiments_parser = subparsers.add_parser( | ||
"experiments", | ||
parents=[parent_parser], | ||
description=append_doc_link(EXPERIMENTS_HELP, "experiments"), | ||
formatter_class=argparse.RawDescriptionHelpFormatter, | ||
) | ||
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experiments_subparsers = experiments_parser.add_subparsers( | ||
dest="cmd", | ||
help="Use `dvc experiments CMD --help` to display " | ||
"command-specific help.", | ||
) | ||
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fix_subparsers(experiments_subparsers) | ||
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EXPERIMENTS_SHOW_HELP = "Print experiments." | ||
experiments_show_parser = experiments_subparsers.add_parser( | ||
"show", | ||
parents=[parent_parser], | ||
description=append_doc_link(EXPERIMENTS_SHOW_HELP, "experiments/show"), | ||
help=EXPERIMENTS_SHOW_HELP, | ||
formatter_class=argparse.RawDescriptionHelpFormatter, | ||
) | ||
experiments_show_parser.add_argument( | ||
"-a", | ||
"--all-branches", | ||
action="store_true", | ||
default=False, | ||
help="Show metrics for all branches.", | ||
) | ||
experiments_show_parser.add_argument( | ||
"-T", | ||
"--all-tags", | ||
action="store_true", | ||
default=False, | ||
help="Show metrics for all tags.", | ||
) | ||
experiments_show_parser.add_argument( | ||
"--all-commits", | ||
action="store_true", | ||
default=False, | ||
help="Show metrics for all commits.", | ||
) | ||
experiments_show_parser.set_defaults(func=CmdExperimentsShow) | ||
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EXPERIMENTS_CHECKOUT_HELP = "Checkout experiments." | ||
experiments_checkout_parser = experiments_subparsers.add_parser( | ||
"checkout", | ||
parents=[parent_parser], | ||
description=append_doc_link( | ||
EXPERIMENTS_CHECKOUT_HELP, "experiments/checkout" | ||
), | ||
help=EXPERIMENTS_CHECKOUT_HELP, | ||
formatter_class=argparse.RawDescriptionHelpFormatter, | ||
) | ||
experiments_checkout_parser.add_argument( | ||
"-f", | ||
"--force", | ||
action="store_true", | ||
default=False, | ||
help="Overwrite your current workspace with changes from the " | ||
"experiment.", | ||
) | ||
experiments_checkout_parser.add_argument( | ||
"experiment", help="Checkout this experiment.", | ||
) | ||
experiments_checkout_parser.set_defaults(func=CmdExperimentsCheckout) | ||
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EXPERIMENTS_DIFF_HELP = ( | ||
"Show changes between experiments in the DVC repository." | ||
) | ||
experiments_diff_parser = experiments_subparsers.add_parser( | ||
"diff", | ||
parents=[parent_parser], | ||
description=append_doc_link(EXPERIMENTS_DIFF_HELP, "experiments/diff"), | ||
help=EXPERIMENTS_DIFF_HELP, | ||
formatter_class=argparse.RawDescriptionHelpFormatter, | ||
) | ||
experiments_diff_parser.add_argument( | ||
"a_rev", nargs="?", help="Old experiment to compare (defaults to HEAD)" | ||
) | ||
experiments_diff_parser.add_argument( | ||
"b_rev", | ||
nargs="?", | ||
help="New experiment to compare (defaults to the current workspace)", | ||
) | ||
experiments_diff_parser.add_argument( | ||
"--all", | ||
action="store_true", | ||
default=False, | ||
help="Show unchanged metrics/params as well.", | ||
) | ||
experiments_diff_parser.add_argument( | ||
"--show-json", | ||
action="store_true", | ||
default=False, | ||
help="Show output in JSON format.", | ||
) | ||
experiments_diff_parser.add_argument( | ||
"--show-md", | ||
action="store_true", | ||
default=False, | ||
help="Show tabulated output in the Markdown format (GFM).", | ||
) | ||
experiments_diff_parser.add_argument( | ||
"--old", | ||
action="store_true", | ||
default=False, | ||
help="Show old metric/param value.", | ||
) | ||
experiments_diff_parser.add_argument( | ||
"--no-path", | ||
action="store_true", | ||
default=False, | ||
help="Don't show metric/param path.", | ||
) | ||
experiments_diff_parser.add_argument( | ||
"--precision", | ||
type=int, | ||
help=( | ||
"Round metrics/params to `n` digits precision after the decimal " | ||
f"point. Rounds to {DEFAULT_PRECISION} digits by default." | ||
), | ||
metavar="<n>", | ||
) | ||
experiments_diff_parser.set_defaults(func=CmdExperimentsDiff) |
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