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scanpy Public
Forked from scverse/scanpySingle-cell analysis in Python. Scales to >1M cells.
Python BSD 3-Clause "New" or "Revised" License UpdatedMay 15, 2024 -
dictys Public
Forked from pinellolab/dictysContext specific and dynamic gene regulatory network reconstruction and analysis
Python GNU Affero General Public License v3.0 UpdatedMar 7, 2024 -
paml-tutorial Public
Forked from abacus-gene/paml-tutorialpaml documentation and tutorials
HTML GNU General Public License v3.0 UpdatedJun 30, 2023 -
handson-ml3 Public
Forked from ageron/handson-ml3A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.
Jupyter Notebook Apache License 2.0 UpdatedOct 20, 2022 -
AlphaFoldx Public
Forked from iamyufan/AlphaFold-ResearchRepo for DKU AlphaFold Research Project
Jupyter Notebook UpdatedAug 11, 2022 -
machine-learning-book Public
Forked from rasbt/machine-learning-bookCode Repository for Machine Learning with PyTorch and Scikit-Learn
Jupyter Notebook MIT License UpdatedJul 29, 2022 -
handson-ml2 Public
Forked from ageron/handson-ml2A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2--2019
Jupyter Notebook Apache License 2.0 UpdatedJul 6, 2022 -
generalCHAB Public
project to compare different algal composition and systems operation
GNU General Public License v3.0 UpdatedJun 17, 2022 -
STREAM Public
Forked from pinellolab/STREAMSTREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data
Jupyter Notebook GNU Affero General Public License v3.0 UpdatedDec 18, 2021 -
vamb Public
Forked from RasmussenLab/vambVariational autoencoder for metagenomic binning
Python MIT License UpdatedJan 14, 2021 -
COVID-19 Public
Forked from CSSEGISandData/COVID-19Novel Coronavirus (COVID-19) Cases, provided by JHU CSSE
UpdatedJan 5, 2021 -
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leela-notes Public
Forked from ai-cloud-kubernetes/leela-notes李宏毅《线性代数》笔记,在线阅读地址 https://datawhalechina.github.io/leela-notes
GNU General Public License v3.0 UpdatedSep 1, 2019 -
NTU-Machine-learning Public
Forked from dafish-ai/NTU-Machine-learning台湾大学李宏毅老师机器学习
Jupyter Notebook UpdatedJul 15, 2019 -
CyanoHABs Public
comparative genomics of blooming cyanobacteria vs non-blooming species
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NTU_ML2017_Hung-yi-Lee_HW Public
Forked from maplezzz/NTU_ML2017_Hung-yi-Lee_HWNTU ML2017 Spring and Fall Homework Hung-yi_Li 李宏毅老师 机器学习课程作业
Jupyter Notebook UpdatedMar 15, 2019 -
WITOD Public
Forked from johncava/WITODA Tool for Within-Taxon Operational Taxonomic Unit (OTU) Diversity
Python UpdatedDec 27, 2018 -
kleuren Public
Forked from Colelyman/kleurenFind bubbles in the Colored de Bruijn Graph to reconstruct phylogenetic trees
C++ MIT License UpdatedSep 20, 2018 -
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tutorials Public
Forked from microgenomics/tutorialsIn this repo you will find demos and tutorials prepared by members of the CBIB. Feel free to use them for non-commercial activities given that you give proper credit. Have fun!
Python MIT License UpdatedApr 1, 2018 -
ecoli_multiple_growth_conditions Public
Forked from umutcaglar/ecoli_multiple_growth_conditionsthe mian repository for e.coli multiple growth conditions
HTML UpdatedMar 23, 2018 -
Meta-Microbiome Public
Forked from qi-lee/Meta-MicrobiomeA pipeline for analyzing metagenomic microbiome datasets
Perl UpdatedJan 15, 2018 -
ITIS Public
Forked from Chuan-Jiang/ITIStool to Identify TE Insertion Sites in genome
Perl UpdatedDec 24, 2017 -
pymegan Public
Forked from etheleon/pymeganPython package and wrapper around MEGAN6 CE's blast2lca
Perl MIT License UpdatedAug 3, 2017 -
cyanonets Public
metabolic networks of select booming and non-blooming cyanobcteria
UpdatedJul 13, 2017 -
metagenomics-workshop Public
Forked from EnvGen/metagenomics-workshopMetagenomics Workshop
Python UpdatedNov 23, 2016 -
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cobratoolbox Public
Forked from opencobra/cobratoolboxCOnstraint-Based Reconstruction and Analysis toolbox
MATLAB GNU General Public License v3.0 UpdatedFeb 4, 2016