Commits

Breadcrumbs

History for

onmain

User selector

All users

Datepicker

All time

Commit History

Commits on Feb 22, 2024

• [STYLE] use ruff in lieu of black/flake8/isort + add pre-commit (SBU-BMI#219)

  Show description for eebff66
  kaczmarj

  authored
  eebff66

  Copy full SHA for eebff66

• Cleanup + add strided patches (SBU-BMI#218)

  Show description for f39f92b
  kaczmarj

  authored
  f39f92b

  Copy full SHA for f39f92b

Commits on Sep 20, 2023

• Fix/geojson command (SBU-BMI#191)

  Show description for c41a9b8
  

  swaradgat19

  and

  kaczmarj

  authored
  c41a9b8

  Copy full SHA for c41a9b8

Commits on Aug 8, 2023

• changed GeoJSON format (SBU-BMI#179)

  Show description for 773de20
  

  swaradgat19

  and

  kaczmarj

  authored
  773de20

  Copy full SHA for 773de20

• skip openslide/tiffslide tests if those backends not available (SBU-BMI#180)

  kaczmarj

  authored
  b0438af

  Copy full SHA for b0438af

Commits on Aug 3, 2023

• Gracefully handle missing backends (SBU-BMI#177)

  Show description for c340691
  kaczmarj

  authored
  c340691

  Copy full SHA for c340691

Commits on Jul 26, 2023

• remove vgg16 and inception breast models (SBU-BMI#169)

  kaczmarj

  authored
  d8f9982

  Copy full SHA for d8f9982

Commits on Jul 24, 2023

• calc mpp with openslide tiff tags (SBU-BMI#166)

  kaczmarj

  authored
  8dbb90f

  Copy full SHA for 8dbb90f

Commits on Jul 19, 2023

• [REF] use custom patching implementation and use Apache 2.0 license (SBU-BMI#153)

  Show description for 3bb7665
  kaczmarj

  authored
  3bb7665

  Copy full SHA for 3bb7665

Commits on Jul 16, 2023

• REF: use torchscript models from huggingface hub (SBU-BMI#144)

  Show description for 8629418
  kaczmarj

  authored
  8629418

  Copy full SHA for 8629418

Commits on May 10, 2023

• handle Path instances for Weights.file (SBU-BMI#127)

  kaczmarj

  authored
  a6e4d41

  Copy full SHA for a6e4d41

Commits on May 9, 2023

• fix bug in setting state dict from relative path (SBU-BMI#123)

  Show description for 45dfeea
  kaczmarj

  authored
  45dfeea

  Copy full SHA for 45dfeea

• replace prad label grade4+5 -> grade4or5 (SBU-BMI#122)

  Show description for c0471c1
  kaczmarj

  authored
  c0471c1

  Copy full SHA for c0471c1

Commits on Apr 7, 2023

• [ADD] vgg16 tils model (SBU-BMI#112)

  Show description for f92d657
  kaczmarj

  authored
  f92d657

  Copy full SHA for f92d657

Commits on Feb 24, 2023

• add more intro content to index.rst (SBU-BMI#104)

  Show description for a937f29
  kaczmarj

  authored
  a937f29

  Copy full SHA for a937f29

Commits on Feb 16, 2023

• write one run_metadata.json file per run (SBU-BMI#100)

  Show description for 716a3c7
  kaczmarj

  authored
  716a3c7

  Copy full SHA for 716a3c7

Commits on Feb 13, 2023

• [FIX] do not panic on unreadable files (SBU-BMI#95)

  Show description for f1953f8
  kaczmarj

  authored
  f1953f8

  Copy full SHA for f1953f8

Commits on Jan 25, 2023

• handle 'git' not being installed (SBU-BMI#90)

  Show description for 21c07d1
  kaczmarj

  authored
  21c07d1

  Copy full SHA for 21c07d1

Commits on Jan 21, 2023

• fix undefined path + add test of valid yaml config (SBU-BMI#78)

  kaczmarj

  authored
  1158030

  Copy full SHA for 1158030

Commits on Jan 20, 2023

• ENH: add a --speedup option and tests (SBU-BMI#75)

  Show description for ee4e669
  kaczmarj

  authored
  ee4e669

  Copy full SHA for ee4e669

Commits on Jan 15, 2023

• FIX: use inceptionv4 from timm (SBU-BMI#69)

  Show description for 1683bba
  kaczmarj

  authored
  1683bba

  Copy full SHA for 1683bba

Commits on Jan 9, 2023

• FIX: add geojson validation in tests + update copyright year (SBU-BMI#59)

  Show description for 2b0af69
  kaczmarj

  authored
  2b0af69

  Copy full SHA for 2b0af69

Commits on Jan 3, 2023

• REF: make modellib private + support numpy docstring style in sphinx docs (SBU-BMI#56)

  Show description for 48d4ac3
  kaczmarj

  authored
  48d4ac3

  Copy full SHA for 48d4ac3

Commits on Dec 26, 2022

• ENH: update dockerfiles and add version to config spec (SBU-BMI#50)

  Show description for 72fe6e2
  kaczmarj

  authored
  72fe6e2

  Copy full SHA for 72fe6e2

Commits on Dec 25, 2022

• ADD: tests of patching and of run_metadata.json (SBU-BMI#49)

  Show description for 6d50ba4
  kaczmarj

  authored
  6d50ba4

  Copy full SHA for 6d50ba4

Commits on Dec 24, 2022

• ENH: use yaml config files to define models (SBU-BMI#48)

  Show description for e321138
  kaczmarj

  authored
  e321138

  Copy full SHA for e321138

Commits on Dec 23, 2022

• Minor fixes (SBU-BMI#46)

  Show description for fdc4c73
  kaczmarj

  authored
  fdc4c73

  Copy full SHA for fdc4c73

• ADD: pytest tests and run in CI (SBU-BMI#45)

  Show description for 907dc9f
  kaczmarj

  authored
  907dc9f

  Copy full SHA for 907dc9f

Loading